Fix regression: Disable Ghostscript JPEG passthrough entirely

Seems to corrupt JPEGs involved in image masks?

.docker/Dockerfile

@@ -1,7 +1,6 @@
 # OCRmyPDF
 #
-FROM      ubuntu:17.04
-MAINTAINER James R. Barlow <jim@purplerock.ca>
+FROM      ubuntu:17.10
 
 RUN apt-get update && apt-get install -y --no-install-recommends \
   software-properties-common python-software-properties \
@@ -29,7 +28,7 @@ RUN python3 -m venv --system-site-packages /appenv
 # (i.e. "pip install ."). It's unclear to me why this is the case.
 RUN . /appenv/bin/activate; \
   pip install --upgrade pip \
-  && pip install ocrmypdf
+  && pip install ocrmypdf[fitz]
 
 # Now copy the application in, mainly to get the test suite.
 # Do this now to make the best use of Docker cache.
@@ -52,4 +51,4 @@ WORKDIR /home/docker
 
 # Must use array form of ENTRYPOINT
 # Non-array form does not append other arguments, because that is "intuitive"
-ENTRYPOINT ["/application/docker-wrapper.sh"]
+ENTRYPOINT ["/application/.docker/docker-wrapper.sh"]

.docker/Dockerfile.polyglot

@@ -14,4 +14,4 @@ USER docker
 
 # Must use array form of ENTRYPOINT
 # Non-array form does not append other arguments, because that is "intuitive"
-ENTRYPOINT ["/application/docker-wrapper.sh"]
+ENTRYPOINT ["/application/.docker/docker-wrapper.sh"]

.docker/Dockerfile.tess4

@@ -1,7 +1,6 @@
 # OCRmyPDF
 #
-FROM 	ubuntu:17.04
-MAINTAINER James R. Barlow <jim@purplerock.ca>
+FROM 	ubuntu:17.10
 
 RUN apt-get update && apt-get install -y --no-install-recommends \
   software-properties-common python-software-properties \
@@ -39,7 +38,7 @@ RUN python3 -m venv --system-site-packages /appenv
 # (i.e. "pip install ."). It's unclear to me why this is the case.
 RUN . /appenv/bin/activate; \
   pip install --upgrade pip \
-  && pip install ocrmypdf
+  && pip install ocrmypdf[fitz]
 
 # Now copy the application in, mainly to get the test suite.
 # Do this now to make the best use of Docker cache.
@@ -62,4 +61,4 @@ WORKDIR /home/docker
 
 # Must use array form of ENTRYPOINT
 # Non-array form does not append other arguments, because that is "intuitive"
-ENTRYPOINT ["/application/docker-wrapper.sh"]
+ENTRYPOINT ["/application/.docker/docker-wrapper.sh"]

.dockerignore

@@ -3,18 +3,9 @@
 *.pyc
 *.rst
 *.sublime*
-*/*.pyc
-*/*/*.pyc
-*/*/*/*.pyc
-*/*/*/*/*.pyc
-*/*/*/*/*/*.pyc
-*/*/*/*/*/*/*.pyc
-*/*/*/*/*/*/*/*.pyc
-.cache/
-.eggs/
-.github/
-.git/
-.ipynb_checkpoints/
+**/*.pyc
+.*/
+!.docker/
 .ruffus_history.sqlite
 bin/
 build/

.gitattributes

@@ -8,6 +8,6 @@
 *.PDF	binary
 *.png	binary
 *.jpg	binary
-
+*.bin   binary
 
 .git_archival.txt  export-subst

.gitignore

@@ -7,6 +7,7 @@ tasks.py
 .bash_history
 .ruffus_history.sqlite
 .idea/
+.pytest_cache/
 
 # Package building
 *.egg-info/
@@ -34,7 +35,6 @@ log/
 /*.qdf
 *.ipynb
 .ipynb_checkpoints/
-tests/cache/
 tests/output/
 tests/resources/private/
 tmp/

.travis.yml

@@ -1,16 +1,13 @@
 dist: trusty
 language: python
 cache:
+  ccache: true
   pip: true
   directories:
-  - packages
-  - tests/cache
   - $HOME/Library/Caches/Homebrew
 
 env:
   global:
-    - secure: "oyX5xesoHD7qcDXKIxMyGZPi+H/WxcvfFkaviEmq84K1DDyHk48+9e92IKgrw8/lcTADnEo/AgVKfnhCPflFimk1xTkgaK4sUg1WLI2YjmaHcwl5SlBHa2rN3uGBwy1hyP92qyv/mMc9R59NtRJ8u76lbn6eN9wi7lkFWdE6BTw="  # DOCKERHUB_OCRMYPDF_TOKEN
-    - secure: "WlyII8YLsiUUyLtEA563GvEZmbneDb/T8q/P1uNbyQ2ps1U82tH0nSUV2CspSMxOFtZzPHCrRvnAmuTYKshBj+GNnBb1J9FKQmFwF+4NPeqsFdUkQ1NeeCmfIRShuNC3Otg2GGwj4Zssdg+QnVy43t2L11qizzfY+lY+MVzAYcM="  # DOCKERHUB_OCRMYPDF_TESS4_TOKEN
     - secure: "hsf6MT+n2x3OiDM2fQyJZdV0/PWYmv81LdVqC6cfnHBE/8N3DloJRqQ7WfO14TxhiK9PEC7MpyCj0lSabUHEO7gSH6Vks6I1asoSkt8S9/bSMlhT4hei+pwVpeGEiU5xHVATNjY+D919VC3IFvc3XmjT74h/2SLhaZ+jhEmDggM="  # HOMEBREW_OCRMYPDF_TOKEN
 
 matrix:
@@ -19,13 +16,25 @@ matrix:
       sudo: required
       language: python
       python: 3.5
+      env: EXTRAS=
     - os: linux
       sudo: required
       language: python
       python: 3.6
+      env: EXTRAS=
+    - os: linux
+      sudo: required
+      language: python
+      python: 3.6
+      env: EXTRAS=[fitz]
     - os: osx
       osx_image: xcode8
       language: generic
+      env: EXTRAS=
+    - os: osx
+      osx_image: xcode8
+      language: generic
+      env: EXTRAS=[fitz]
 
 before_cache:
 - rm -f $HOME/.cache/pip/log/debug.log
@@ -34,28 +43,27 @@ before_install: |
   if [[ "$TRAVIS_OS_NAME" == "linux" ]]; then
     bash .travis/linux_before_install.sh
   elif [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
-    bash .travis/osx_before_install.sh
+    brew update && brew bundle --file=.travis/Brewfile
+    pip3 install --upgrade pip
+    pip3 install wheel
   fi
 
 install:
-- pip3 install .
-- pip3 install -r requirements.txt -r test_requirements.txt
+- pip3 install ".$EXTRAS"
+- pip3 install -r test_requirements.txt
 
 script:
-- mv ocrmypdf dont_import_this_ocrmypdf
 - tesseract --version
 - qpdf --version
-- pytest
-- mv dont_import_this_ocrmypdf ocrmypdf
+- pytest -n auto
 
 deploy:
   # release for main pypi
-  # 3.6 is considered the build leader and does the deploy, otherwise there is
+  # 3.6 w/o fitz is considered the build leader and does the deploy, otherwise there is
   # a race and all versions will try to deploy
   # OTOH if we ever need separate binary wheels then each version needs its
   # own deploy
 - provider: pypi
-  server: https://upload.pypi.org/legacy/
   user: ocrmypdf-travis
   password:
     secure: "DTFOmmNL6olA0+yXvp4u9jXZlZeqrJsJ0526jzqf4a3gZ6jnGTq5UI6WzRsslSyoMMfXKtHQebqHM6ogSgCZinyZ3ufHJo8fn9brxbEc2gsiWkbj5o3bGwdWMT1vNNE7XW0VCpw87rZ1EEwjl4FJHFudMlPR1yfU5+uq0k0PACo="
@@ -63,7 +71,7 @@ deploy:
   on:
     branch: master
     tags: true
-    condition: $TRAVIS_PYTHON_VERSION == "3.6" && $TRAVIS_OS_NAME == "linux"
+    condition: $TRAVIS_PYTHON_VERSION == "3.6" && $TRAVIS_OS_NAME == "linux" && $EXTRAS == ""
   skip_upload_docs: true
 
   # test pypi
@@ -92,7 +100,4 @@ deploy:
 after_deploy: |
   if [[ "$TRAVIS_OS_NAME" == "osx" ]]; then
     bash .travis/osx_brew.sh
-  elif [[ "$TRAVIS_PYTHON_VERSION" == "3.6" && "$TRAVIS_OS_NAME" == "linux" ]]; then
-    curl -H "Content-Type: application/json" --data '{"build": true}' -X POST https://registry.hub.docker.com/u/jbarlow83/ocrmypdf/trigger/$DOCKERHUB_OCRMYPDF_TOKEN/
-    curl -H "Content-Type: application/json" --data '{"build": true}' -X POST https://registry.hub.docker.com/u/jbarlow83/ocrmypdf-tess4/trigger/$DOCKERHUB_OCRMYPDF_TESS4_TOKEN/
-  fi
+  fi

.travis/Brewfile

@@ -0,0 +1,13 @@
+brew 'python'
+
+brew 'ghostscript'
+brew 'jbig2dec'
+brew 'leptonica'
+brew 'libffi'
+brew 'libtiff'
+brew 'libxml2'
+brew 'mupdf-tools'
+brew 'openjpeg'
+brew 'qpdf'
+brew 'tesseract'
+brew 'unpaper'

.travis/autobrew.py

@@ -1,5 +1,5 @@
 #!/usr/bin/env python3
-# © 2016-7 James R. Barlow: github.com/jbarlow83
+# © 2017-18 James R. Barlow: github.com/jbarlow83
 
 from string import Template
 from subprocess import run, PIPE
@@ -14,12 +14,13 @@ class Ocrmypdf < Formula
   ${ocrmypdf_url}
   ${ocrmypdf_sha256}
 
+  depends_on "pkg-config" => :build
+  depends_on "mupdf-tools" => :build  # statically links libmupdf.a
   depends_on "freetype"
   depends_on "ghostscript"
   depends_on "jpeg"
   depends_on "libpng"
-  depends_on "pkg-config" => :build
-  depends_on "python3"
+  depends_on "python"
   depends_on "qpdf"
   depends_on "tesseract"
   depends_on "unpaper"
@@ -55,28 +56,9 @@ ${resources}
     # Since we use Python 3, we require a UTF-8 locale
     ENV["LC_ALL"] = "en_US.UTF-8"
 
-    # One page Postscript with the wording "Testing" on the page
-    # This is more compact than including a test PDF
-    (testpath/"test.ps").write(
-      <<~EOS
-        %!PS
-        /Times-Roman findfont
-        20 scalefont
-        setfont
-        gsave
-        newpath
-        200 400 moveto
-        (Testing) show
-        closepath
-        stroke
-        showpage
-      EOS
-    )
-
-    system "#{Formula["ghostscript"].opt_bin}/ps2pdf", testpath/"test.ps", testpath/"test.pdf"
-
-    # Use ocrmypdf -f to rasterize the PDF to image before doing OCR
-    system "#{bin}/ocrmypdf", "-f", "-q", "--deskew", testpath/"test.pdf", testpath/"ocr.pdf"
+    system "#{bin}/ocrmypdf", "-f", "-q", "--deskew",
+                              test_fixtures("test.pdf"), "ocr.pdf"
+    assert_predicate testpath/"ocr.pdf", :exist?
   end
 end
 """)

.travis/linux_before_install.sh

@@ -8,7 +8,6 @@ sudo add-apt-repository ppa:heyarje/libav-11 -y
 sudo apt-get update -qq
 sudo apt-get install -y \
 	ghostscript \
-	qpdf \
 	poppler-utils \
 	libavformat56 \
 	libavcodec56 \
@@ -27,5 +26,17 @@ sudo apt-get install -y --no-install-recommends \
 
 pip install --upgrade pip
 mkdir -p packages
-[ -f packages/unpaper_6.1-1.deb ] || wget -q 'https://www.dropbox.com/s/vaq0kbwi6e6au80/unpaper_6.1-1.deb?raw=1' -O packages/unpaper_6.1-1.deb
+wget -q 'https://www.dropbox.com/s/vaq0kbwi6e6au80/unpaper_6.1-1.deb?raw=1' -O packages/unpaper_6.1-1.deb
 sudo dpkg -i packages/unpaper_6.1-1.deb
+
+if [ ! -f /usr/local/bin/qpdf ]; then
+	export QPDF_RELEASE='https://github.com/qpdf/qpdf/releases/download/release-qpdf-8.0.2/qpdf-8.0.2.tar.gz'
+	mkdir qpdf
+    wget -q $QPDF_RELEASE -O - | tar xz -C qpdf --strip-components=1
+    cd qpdf/
+	export PATH="/usr/local/opt/ccache/libexec:$PATH"
+    ./configure --prefix=/usr
+    make -j 2
+    sudo make install
+    cd ..
+fi

.travis/osx_before_install.sh

@@ -1,17 +0,0 @@
-#!/bin/bash
-# © 2017 James R. Barlow: github.com/jbarlow83
-set -euo pipefail
-set -x
-
-brew update
-
-brew install openjpeg jbig2dec libtiff     # image libraries
-brew install qpdf
-brew install ghostscript
-brew install python3
-brew install libxml2 libffi leptonica
-brew install unpaper   # optional
-brew install tesseract
-
-pip3 install --upgrade pip
-pip3 install wheel

.travis/osx_brew.sh

@@ -1,6 +1,6 @@
 #!/bin/bash
 # © 2017 James R. Barlow: github.com/jbarlow83
-set -euo pipefail
+set -uo pipefail
 set -x
 
 pip3 install homebrew-pypi-poet

LICENSE

@@ -0,0 +1,674 @@
+                    GNU GENERAL PUBLIC LICENSE
+                       Version 3, 29 June 2007
+
+ Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
+ Everyone is permitted to copy and distribute verbatim copies
+ of this license document, but changing it is not allowed.
+
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+Public License instead of this License.  But first, please read
+<https://www.gnu.org/licenses/why-not-lgpl.html>.

LICENSE.rst

@@ -1,23 +0,0 @@
-Copyright (c) 2014-2017, James R. Barlow
-
-Copyright (c) 2013-2014, Julien Pfefferkorn
-Copyright (c) 2013-2017, The OCRmyPDF Authors
-
-Permission is hereby granted, free of charge, to any person obtaining a
-copy of this software and associated documentation files (the
-"Software"), to deal in the Software without restriction, including
-without limitation the rights to use, copy, modify, merge, publish,
-distribute, sublicense, and/or sell copies of the Software, and to
-permit persons to whom the Software is furnished to do so, subject to
-the following conditions:
-
-The above copyright notice and this permission notice shall be included
-in all copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
-OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
-MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
-IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
-CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
-TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
-SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

MANIFEST.in

@@ -7,11 +7,10 @@ include dev_requirements.txt
 include .git_archival.txt
 
 # docker
-include Dockerfile*
 include .dockerignore
+recursive-include .docker *
 
 # tests
-include pytest.ini
 include .coveragerc
 recursive-include tests *.jpg
 recursive-include tests *.png
@@ -19,14 +18,14 @@ recursive-include tests *.pdf
 recursive-include tests *.py
 recursive-include tests *.rst
 recursive-include tests *.txt
+recursive-include tests/cache *
 recursive-exclude tests/output *
 recursive-exclude tests/output_pageinfo *
 recursive-exclude tests/resources/private *
-recursive-exclude tests/cache *
 
 # documentation
+include LICENSE
 include *.rst
-include pipeline.svg
 recursive-exclude .github * 
 recursive-include docs *.py
 recursive-include docs *.rst
@@ -35,17 +34,16 @@ recursive-exclude docs/_build *
 
 
 # support files
-recursive-include ocrmypdf/data *
+recursive-include src/ocrmypdf/data *
 include *.py
 exclude tasks.py
-exclude debug-runner.py
 recursive-exclude .travis *
 exclude .travis*
 
 
 # code
-recursive-include ocrmypdf *.py
+recursive-include src/ocrmypdf *.py
 exclude ocrmypdf/lib/_leptonica.py
-include docker-wrapper.sh
+
 
 

README.rst

@@ -7,8 +7,10 @@ OCRmyPDF
 .. image:: https://img.shields.io/pypi/v/ocrmypdf.svg   
     :target: https://pypi.org/project/ocrmypdf/
 
-.. image:: https://img.shields.io/docker/build/jbarlow83/ocrmypdf.svg
-    :target: https://hub.docker.com/r/jbarlow83/ocrmypdf/
+.. image:: https://img.shields.io/homebrew/v/ocrmypdf.svg   
+    :alt: homebrew
+    :target: http://brewformulas.org/Ocrmypdf
+
 
 OCRmyPDF adds an OCR text layer to scanned PDF files, allowing them to
 be searched or copy-pasted.
@@ -74,11 +76,10 @@ Users of Debian 9 or later or Ubuntu 16.10 or later may simply
 
    apt-get install ocrmypdf
 
-and macOS users may simply
+and macOS users with Homebrew may simply
 
 .. code-block:: bash
 
-   brew tap jbarlow83/ocrmypdf
    brew install ocrmypdf
 
 For everyone else, `see our documentation <https://ocrmypdf.readthedocs.io/en/latest/installation.html>`_ for installation steps.
@@ -127,7 +128,7 @@ Requirements
 
 Runs on CPython 3.6, and requires external program installations of Ghostscript, Tesseract OCR, QPDF, and Leptonica. ocrmypdf is pure Python, but uses CFFI to portably generate library bindings.
 
-Python 3.5 is fully supported, but support will end at the end of 2017, to allow f-strings in the code base.
+Python 3.5 is also supported.
 
 Press & Media
 -------------
@@ -138,6 +139,15 @@ Press & Media
 -  `heise Open Source, 09/2014: Texterkennung mit
    OCRmyPDF <http://heise.de/-2356670>`_
 
+License
+-------
+
+The OCRmyPDF software is licensed under the GNU GPLv3. Certain files are covered by other licenses, as noted in their source files. 
+
+The license for each test file varies, and is noted in tests/resources/README.rst. The documentation is licensed under Creative Commons Attribution-ShareAlike 4.0 (CC-BY-SA 4.0).
+
+OCRmyPDF versions prior to 6.0 were licensed under the MIT License.
+
 Disclaimer
 ----------
 

dev_requirements.txt

@@ -1,10 +1,4 @@
 check-manifest >= 0.35
 twine >= 1.8.1
 coverage >= 4.4
-pytest-xdist >= 1.16.0
 GitPython == 2.1.3
-
-# Known good versions: 1.11.1
-# Known broken versions: 1.15.0
-setuptools-scm == 1.11.1
-setuptools-scm-git-archive == 1.0

docs/advanced.rst

@@ -19,7 +19,7 @@ If ``--force-ocr`` is issued, then all pages will be rasterized to images, disca
 Time and image size limits
 """"""""""""""""""""""""""
 
-By default, OCRmyPDF permits tesseract to run for only three minutes (180 seconds) per page. This is usually more than enough time to find all text on a reasonably sized page with modern hardware. 
+By default, OCRmyPDF permits tesseract to run for three minutes (180 seconds) per page. This is usually more than enough time to find all text on a reasonably sized page with modern hardware. 
 
 If a page is skipped, it will be inserted without OCR. If preprocessing was requested, the preprocessed image layer will be inserted.
 
@@ -33,26 +33,28 @@ If you want to adjust the amount of time spent on OCR, change ``--tesseract-time
 Overriding default tesseract
 """"""""""""""""""""""""""""
 
-OCRmyPDF checks the environment variable ``OCRMYPDF_TESSERACT`` for the full path *to the tesseract binary* first. 
+OCRmyPDF checks the system ``PATH`` for the ``tesseract`` binary.  
 
-.. envvar:: OCRMYPDF_TESSERACT
-
-	Specify the location of the Tesseract binary.
+Some relevant environment variables that influence Tesseract's behavior include:
 
 .. envvar:: TESSDATA_PREFIX
 
-	A Tesseract environment variable that overrides the path to Tesseract's data files.
+	Overrides the path to Tesseract's data files. This can allow simultaneous installation of the "best" and "fast" training data sets. OCRmyPDF does not manage this environment variable.
 
-For example, if you are testing tesseract 4.00 and don't wish to disturb use an existing tesseract 3.04 installation, you can launch OCRmyPDF as follows:
+.. envvar:: OMP_THREAD_LIMIT
+
+	Controls the number of threads Tesseract will use. OCRmyPDF will manage this environment if it is not already set. (Currently, it will set it to 1 because this gives the best results in testing.)
+
+For example, if you are testing tesseract 4.00 and don't wish to use an existing tesseract 3.04 installation, you can launch OCRmyPDF as follows:
 
 .. code-block:: bash
 
 	env \
-		OCRMYPDF_TESSERACT=/home/user/src/tesseract4/api/tesseract \
+		PATH=/home/user/src/tesseract4/api:$PATH \
 		TESSDATA_PREFIX=/home/user/src/tesseract4 \
 		ocrmypdf --tesseract-oem 2 input.pdf output.pdf
 
-In this example ``TESSDATA_PREFIX`` directs tesseract 4.0 to use LSTM training data. ``--tesseract-oem 1`` requests tesseract 4.0's new LSTM engine. (Tesseract 4.0 only.)
+In this example ``TESSDATA_PREFIX`` directs Tesseract 4.0 to use LSTM training data. ``--tesseract-oem 1`` requests tesseract 4.0's new LSTM engine. (Tesseract 4.0 only.)
 
 
 Overriding other support programs
@@ -64,19 +66,7 @@ In addition to tesseract, OCRmyPDF uses the following external binaries:
 * ``unpaper``
 * ``qpdf``
 
-In each case OCRmyPDF will check the environment variable ``OCRMYPDF_{program}`` before asking the system to find ``{program}`` on the PATH. For example, you could redirect OCRmyPDF to ``OCRMYPDF_GS`` to override Ghostscript. The full list is below:
-
-.. envvar:: OCRMYPDF_GS
-
-	Specify the location of the Ghostscript binary.
-
-.. envvar:: OCRMYPDF_UNPAPER
-
-	Specify the location of the unpaper binary.
-
-.. envvar:: OCRMYPDF_QPDF
-
-	Specify the location of the qpdf binary.
+In each case OCRmyPDF will search the ``PATH`` environment variable to locate the binaries.
 
 
 Changing tesseract configuration variables
@@ -115,13 +105,15 @@ rendering
   Creating a new PDF from other data (such as an existing PDF).
 
 
-OCRmyPDF has three PDF renderers: ``sandwich``, ``hocr``, ``tesseract``. The renderer may be selected using ``--pdf-renderer``. The default is ``auto`` which lets OCRmyPDF select the renderer to use. Currently, ``auto`` selects ``sandwich`` for Tesseract 3.05.01, and newer, ``hocr`` for older versions of Tesseract.
+OCRmyPDF has three PDF renderers: ``sandwich``, ``hocr``, ``tesseract``. The renderer may be selected using ``--pdf-renderer``. The default is ``auto`` which lets OCRmyPDF select the renderer to use. Currently, ``auto`` selects ``sandwich`` for Tesseract 3.05.01 or newer, or ``hocr`` for older versions of Tesseract.
 
 The ``sandwich`` renderer
 """""""""""""""""""""""""
 
 The ``sandwich`` renderer uses Tesseract's new text-only PDF feature, which produces a PDF page that lays out the OCR in invisible text. This page is then "sandwiched" onto the original PDF page, allowing lossless application of OCR even to PDF pages that contain other vector objects.
 
+Currently this is the best renderer for most uses, however it is implemented in Tesseract so OCRmyPDF cannot influence it. Currently some problematic PDF viewers like Mozilla PDF.js and macOS Preview have problems with segmenting its text output, and mightrunseveralwordstogether.
+
 When image preprocessing features like ``--deskew`` are used, the original PDF will be rendered as a full page and the OCR layer will be placed on top.
 
 This renderer requires Tesseract 3.05.01 or newer.
@@ -131,13 +123,17 @@ The ``hocr`` renderer
 
 The ``hocr`` renderer works with older versions of Tesseract. The image layer is copied from the original PDF page if possible, avoiding potentially lossy transcoding or loss of other PDF information. If preprocessing is specified, then the image layer is a new PDF.
 
+Unlike ``sandwich`` this renderer is implemented within OCRmyPDF; anyone looking to customize how OCR is presented should look here. A major disadvantage of this renderer is it not capable of correctly handling text outside the Latin alphabet. Pull requests to improve the situation are welcome.
+
+Currently, this renderer has the best compatibility with Mozilla's PDF.js viewer.
+
 This works in all versions of Tesseract.
 
 The ``tesseract`` renderer
 """"""""""""""""""""""""""
 
-The ``tesseract`` renderer creates a PDF with the image and text layers precomposed, meaning that it always transcodes, loses image quality and rasterizes and vector objects. It does a better job on non-Latin text and document structure than ``hocr``.
+The ``tesseract`` renderer creates a PDF with the image and text layers precomposed, meaning that it always transcodes, loses image quality and rasterizes any vector objects. It does a better job on non-Latin text and document structure than ``hocr``.
 
 If a PDF created with this renderer using Tesseract versions older than 3.05.00 is then passed through Ghostscript's pdfwrite feature, the OCR text *may* be corrupted. The ``--output-type=pdfa`` argument will produce a warning in this situation.
 
-*This renderer is deprecated and will be removed whenever support for older versions of Tesseract is dropped.*
+*This renderer is deprecated and will be removed whenever support for older versions of Tesseract is dropped.*

docs/batch.rst

@@ -18,6 +18,8 @@ The ``--tag`` argument tells parallel to print the filename as a prefix whenever
 
 	parallel --tag -j 2 ocrmypdf '{}' 'output/{}' ::: *.pdf
 
+OCRmyPDF automatically repairs PDFs before parsing and gathering information from them.  If you are already repairing PDFs with ``qpdf`` prior to attempting OCR, or you can use ``--skip-repair`` to skip this step.  It may improve performance for large files, since repairing PDFs is single-threaded.
+
 Directory trees
 ---------------
 

docs/conf.py

@@ -52,7 +52,7 @@ master_doc = 'index'
 
 # General information about the project.
 project = 'ocrmypdf'
-copyright = '2017, James R. Barlow'
+copyright = '2018, James R. Barlow. Licensed under Creative Commons Attribution-ShareAlike 4.0.'
 author = 'James R. Barlow'
 
 # The version info for the project you're documenting, acts as replacement for
@@ -60,7 +60,7 @@ author = 'James R. Barlow'
 # built documents.
 #
 # The short X.Y version.
-from ocrmypdf import VERSION as OCRMYPDF_VERSION
+from ocrmypdf import __version__ as OCRMYPDF_VERSION
 
 _version_parts = OCRMYPDF_VERSION.split('.')
 

docs/cookbook.rst

@@ -55,6 +55,8 @@ OCR will attempt to automatic correct the rotation of each page. This can help f
 
 You can increase (decrease) the parameter ``--rotate-pages-threshold`` to make page rotation more (less) aggressive.
 
+If the page is "just a little off horizontal", like a crooked picture, then you want ``--deskew``. ``--rotate-pages`` is for when the cardinal angle is wrong.
+
 
 OCR languages other than English
 """"""""""""""""""""""""""""""""
@@ -81,15 +83,28 @@ This produces a file named "output.pdf" and a companion text file named "output.
 OCR images, not PDFs
 --------------------
 
-Use a program like `img2pdf <https://gitlab.mister-muffin.de/josch/img2pdf>`_ to convert your images to PDFs, and then pipe the results to run ocrmypdf:
+If you are starting with images, you can just use Tesseract 3.04 or later directly to convert images to PDFs:
+
+.. code-block:: bash
+
+    tesseract my-image.jpg output-prefix pdf
+
+.. code-block:: bash
+
+    # When there are multiple images
+    tesseract text-file-containing-list-of-image-filenames.txt output-prefix pdf
+
+Tesseract's PDF output is quite good – OCRmyPDF uses it by internally by default. However, OCRmyPDF has many features not available in Tesseract like like image processing, metadata control, and PDF/A generation.
+
+Use a program like `img2pdf <https://gitlab.mister-muffin.de/josch/img2pdf>`_ to convert your images to PDFs, and then pipe the results to run ocrmypdf.  The `-` tells ocrmypdf to read standard input.
 
 .. code-block:: bash
 
     img2pdf my-images*.jpg | ocrmypdf - myfile.pdf
 
-``img2pdf`` also has features to control the position of images on a page, if desired.
+``img2pdf`` is recommended because it does an excellent job at generating PDFs without transcoding images.
 
-For convenience, OCRmyPDF can convert single images to PDFs on its own. If the resolution (dots per inch, DPI) of an image is not set or is incorrect, it can be overridden with ``--image-dpi``. (As 1 inch is 2.54 cm, 1 dpi = 0.39 dpcm).
+For convenience, OCRmyPDF can also convert single images to PDFs on its own. If the resolution (dots per inch, DPI) of an image is not set or is incorrect, it can be overridden with ``--image-dpi``. (As 1 inch is 2.54 cm, 1 dpi = 0.39 dpcm).
 
 .. code-block:: bash
 
@@ -101,11 +116,6 @@ If you have multiple images, you must use ``img2pdf`` to convert the images to P
 
     ImageMagick ``convert`` can also convert a group of images to PDF, but in the author's experience it takes a long time, transcodes unnecessarily and gives poor results.
 
-You can also use Tesseract 3.04+ directly to convert single page images or multi-page TIFFs to PDF:
-
-.. code-block:: bash
-
-    tesseract my-image.jpg output-prefix pdf
 
 Image processing
 ----------------

docs/index.rst

@@ -9,7 +9,7 @@ OCRmyPDF documentation
 OCRmyPDF adds an OCR text layer to scanned PDF files, allowing them to
 be searched.
 
-PDFs are the best format for scanned documents.  Unfortunately, PDFs can be difficult to work with. OCRmyPDF makes it easy to apply image processing and OCR to existing PDFs.
+PDF is the best format for storing and exchanging scanned documents.  Unfortunately, PDFs can be difficult to modify. OCRmyPDF makes it easy to apply image processing and OCR to existing PDFs.
 
 .. toctree::
    :maxdepth: 1

docs/installation.rst

@@ -1,7 +1,13 @@
 Installation
 ============
 
-OCRmyPDF requires Python 3.5 (or newer) and Tesseract 3.04 (or newer).
+The easiest way to install OCRmyPDF to follow the steps for your operating system/platform. 
+
+If you want to use the latest version of OCRmyPDF, your best bet is to install the most recent version your platform provides, and then upgrade that version by installing the Python binary wheels.
+
+.. contents:: Platform-specific steps
+    :depth: 1
+    :local:
 
 Installing on Debian and Ubuntu 16.10 or newer
 ----------------------------------------------
@@ -12,21 +18,29 @@ Users of Debian 9 ("stretch") or later or Ubuntu 16.10 or later may simply
 
     apt-get install ocrmypdf
 
-Installing on macOS
--------------------
+To see what versions are available, check the `Debian Package Tracker <https://tracker.debian.org/pkg/ocrmypdf>`_ or `Ubuntu launchpad.net <https://launchpad.net/ocrmypdf>`_.
 
-A `Homebrew <https://brew.sh>`_ tap is available for macOS:
+Installing on macOS with Homebrew
+---------------------------------
+
+.. image:: https://img.shields.io/homebrew/v/ocrmypdf.svg   
+    :alt: homebrew
+    :target: http://brewformulas.org/Ocrmypdf
+
+OCRmyPDF is now a standard `Homebrew <https://brew.sh>`_ formula. To install on macOS:
 
 .. code-block:: bash
 
-    brew tap jbarlow83/ocrmypdf
     brew install ocrmypdf
 
-
-.. warning::
+.. note::
 
     Users who previously installed OCRmyPDF on macOS using ``pip install ocrmypdf`` should remove the pip version (``pip3 uninstall ocrmypdf``) before switching to the Homebrew version.
 
+.. note::
+
+    Users who previously installed OCRmyPDF from the private tap should switch to the mainline version (``brew untap jbarlow83/ocrmypdf``) and install from there.
+
 .. _Docker-install:
 
 Installing the Docker image
@@ -34,11 +48,9 @@ Installing the Docker image
 
 For many users, installing the Docker image will be easier than installing all of OCRmyPDF's dependencies. For Windows, it is the only option.
 
-If you have `Docker <https://docs.docker.com/>`_ installed on your system, you can install
-a Docker image of the latest release.
+If you have `Docker <https://docs.docker.com/>`_ installed on your system, you can install a Docker image of the latest release.
 
-Follow the Docker installation instructions for your platform.  If you can run this command
-successfully, your system is ready to download and execute the image:
+Follow the Docker installation instructions for your platform.  If you can run this command successfully, your system is ready to download and execute the image:
 
 .. code-block:: bash
 
@@ -56,16 +68,22 @@ OCRmyPDF will use all available CPU cores.  By default, the VirtualBox machine i
 
 Assuming you have a Docker engine running, you can download one of the three available images:
 
-+-----------------------------+---------------------------------------------+---------------------------------------------------------------------------------+
-| Image name                  | Download command                            | Notes                                                                           |
-+-----------------------------+---------------------------------------------+---------------------------------------------------------------------------------+
-| ocrmypdf                    | ``docker pull jbarlow83/ocrmypdf``          | Latest ocrmypdf with Tesseract 3.04. Includes English, French, German, Spanish. |
-+-----------------------------+---------------------------------------------+---------------------------------------------------------------------------------+
-| ocrmypdf-polyglot           | ``docker pull jbarlow83/ocrmypdf-polyglot`` | As above, with all available language packs.                                    |
-+-----------------------------+---------------------------------------------+---------------------------------------------------------------------------------+
-| ocrmypdf-tess4              | ``docker pull jbarlow83/ocrmypdf-tess4``    | Latest ocrmypdf with Tesseract 4.00.00alpha and English, French, German,        |
-|                             |                                             | Spanish, Portuguese, Chinese Simplified, Arabic and Russian (the top 8).        |
-+-----------------------------+---------------------------------------------+---------------------------------------------------------------------------------+
+.. list-table::
+    :widths: auto
+    :header-rows: 1
+
+    *   - Image name
+        - Download command
+        - Notes
+    *   - ocrmypdf
+        - ``docker pull jbarlow83/ocrmypdf``
+        - Latest ocrmypdf with Tesseract 3.x. Includes English, French, German, Spanish.
+    *   - ocrmypdf-polyglot
+        - ``docker pull jbarlow83/ocrmypdf-polyglot``
+        - As above, with all available language packs.
+    *   - ocrmypdf-tess4
+        - ``docker pull jbarlow83/ocrmypdf-tess4``
+        - Latest ocrmypdf with Tesseract 4.x and English, French, German, Spanish, Portuguese, Chinese Simplified, Arabic and Russian (the top 8).
 
 For example:
 
@@ -167,24 +185,25 @@ Install the required Tesseract OCR engine with the language packs you plan to us
 
     brew install tesseract --with-all-languages  # Option 2: for all language packs
 
-Update the homebrew pip and install Pillow:
+Update the homebrew pip:
 
 .. code-block:: bash
 
     pip3 install --upgrade pip
-    pip3 install --upgrade pillow
 
 You can then install OCRmyPDF from PyPI, for the current user:
 
 .. code-block:: bash
 
-    pip3 install --user ocrmypdf
+    pip3 install --user ocrmypdf[fitz]
 
 or system-wide:
 
 .. code-block:: bash
 
-    pip3 install ocrmypdf
+    pip3 install ocrmypdf[fitz]
+
+``[fitz]`` includes the optional dependency on PyMuPDF, which improves OCRmyPDF's output in many cases.
 
 The command line program should now be available:
 
@@ -213,29 +232,29 @@ If you wish install OCRmyPDF for the current user:
 
 .. code-block:: bash
 
-    pip3 install --user ocrmypdf
+    pip3 install --user ocrmypdf[fitz]
 
 Alternately, system-wide. Note that this may modify the system Python environment:
 
 .. code-block:: bash
 
-    sudo pip3 install ocrmypdf
+    sudo pip3 install ocrmypdf[fitz]
 
-If you wish to install OCRmyPDF to a virtual environment to isolate the system Python, you can
-follow these steps.
+If you wish to install OCRmyPDF to a virtual environment to isolate the system Python, you can follow these steps.
 
 .. code-block:: bash
 
     python3 -m venv venv-ocrmypdf
     source venv-ocrmypdf/bin/activate
-    pip3 install ocrmypdf
+    pip3 install ocrmypdf[fitz]
+
+``[fitz]`` includes the optional dependency on PyMuPDF, which improves OCRmyPDF's output in many cases.
 
 
 Installing on Ubuntu 14.04 LTS
 ------------------------------
 
-Installing on Ubuntu 14.04 LTS (trusty) is more difficult than some other options,
-because it is older and does not provide ``pip``.
+Installing on Ubuntu 14.04 LTS (trusty) is more difficult than some other options, because it is older and does not provide ``pip``.
 
 Update apt-get:
 
@@ -254,10 +273,7 @@ Install system dependencies:
         libffi-dev \
         qpdf
 
-We will need backports of Ghostscript 9.16, libav-11 (for unpaper 6.1),
-Tesseract 4.00 (alpha), and Python 3.6. This will replace Ghostscript and
-Tesseract 3.x on your system. Python 3.6 will be installed alongside the system
-Python 3.
+We will need backports of Ghostscript 9.16, libav-11 (for unpaper 6.1), Tesseract 4.00 (alpha), and Python 3.6. This will replace Ghostscript and Tesseract 3.x on your system. Python 3.6 will be installed alongside the system Python 3.
 
 If you prefer to not modify your system in this matter, consider using a Docker container.
 
@@ -271,7 +287,7 @@ If you prefer to not modify your system in this matter, consider using a Docker
     sudo apt-get update
 
     sudo apt-get install \
-        python3.6 \
+        python3.6-dev \
         ghostscript \
         tesseract-ocr \
         tesseract-ocr-eng \
@@ -282,8 +298,10 @@ Now we need to install ``pip`` and let it install ocrmypdf:
 
 .. code-block:: bash
 
-    wget -O - -o /dev/null https://bootstrap.pypa.io/get-pip.py | python3.6
-    pip3.6 install ocrmypdf
+    curl https://bootstrap.pypa.io/ez_setup.py -o - | python3.6 && python3.6 -m easy_install pip
+    pip3.6 install ocrmypdf[fitz]
+
+The ``wget`` command will download a program and run it.
 
 These installation instructions omit the optional dependency ``unpaper``, which is only available at version 0.4.2 in Ubuntu 14.04. The author could not find a backport of ``unpaper``, and created a .deb package to do the job of installing unpaper 6.1 (for x86 64-bit only):
 
@@ -308,6 +326,9 @@ Installing on Windows
 
 Direct installation on Windows is not possible.  Install the _`Docker` container as described above.  Ensure that your command prompt can run the docker "hello world" container.
 
+It would probably not be too difficult to run on Windows.  The main reason this has been avoided is the difficulty of packaging and installing the various non-Python dependencies: Tesseract, QPDF, Ghostscript, Leptonica.  Pull requests to add or improve Windows support would be quite welcome.
+
+
 Running on Windows
 ~~~~~~~~~~~~~~~~~~
 
@@ -321,11 +342,56 @@ where /c/Users/sampleuser is a Unix representation of the Windows path C:\\Users
 
 `Bash on Ubuntu on Windows <https://github.com/Microsoft/BashOnWindows>`_ should also be a viable route for running the OCRmyPDF Docker container.
 
+
+Installing with Python pip
+--------------------------
+
+First, install `your platform's version <https://repology.org/metapackage/ocrmypdf/versions>`_ of ``ocrmypdf``, if available, as a way of ensuring that external dependencies are (mostly) satisified, even though the platform version may be out of date. Use ``ocrmypdf --version`` to confirm what version was installed.
+
+Then you can install the latest OCRmyPDF from the Python wheels. First try:
+
+.. code-block:: bash
+
+    pip3 install --user ocrmypdf
+
+You should then be able to run ``ocrmypdf --version`` and see that the latest version was located.
+
+Since ``pip3 install --user`` does not work correctly on some platforms, notably Ubuntu 16.04 and older, and the Homebrew version of Python, instead use this for a system wide installation:
+
+.. code-block:: bash
+
+    pip3 install ocrmypdf
+
+Requirements for pip and HEAD install
+~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+
+OCRmyPDF currently requires these external programs to be installed:
+
+- Python 3.5 or newer
+- Tesseract 3.04 or newer
+- Ghostscript 9.15 or newer
+- qpdf 7.0.0 or newer
+
+The following dependencies are recommended:
+
+- Python 3.6
+- Tesseract 4.00 or newer
+- Ghostscript 9.22 or newer
+- qpdf 8.0.2 or newer
+- unpaper 6.1
+- PyMuPDF 1.12.5 or newer
+
+These are in addition to the Python packaging dependencies, meaning that unfortunately, the ``pip install`` command cannot satisfy all of them. 
+
+Python 3.6 and Tesseract 4.x are recommended for best OCR results and best performance.
+
+The library PyMuPDF is not widely available in platform distributions, and it improves OCRmyPDF in certain conditions. Consider installing OCRmyPDF from the Python binary wheels, which include a precompiled version of this library.
+
+
 Installing HEAD revision from sources
 -------------------------------------
 
-If you have ``git`` and Python 3.5 or newer installed, you can install from source. When the ``pip`` installer runs,
-it will alert you if dependencies are missing.
+If you have ``git`` and Python 3.5 or newer installed, you can install from source. When the ``pip`` installer runs, it will alert you if dependencies are missing.
 
 To install the HEAD revision from sources in the current Python 3 environment:
 
@@ -339,15 +405,7 @@ Or, to install in `development mode <https://pythonhosted.org/setuptools/setupto
 
     pip3 install -e git+https://github.com/jbarlow83/OCRmyPDF.git
 
-On certain Linux distributions such as Ubuntu, you may need to use 
-run the install command as superuser:
-
-.. code-block:: bash
-
-    sudo pip3 install [-e] git+https://github.com/jbarlow83/OCRmyPDF.git
-
-Note that this will alter your system's Python distribution. If you prefer 
-to not install as superuser, you can install the package in a Python virtual environment:
+You may find it easiest to install in a virtual environment, rather than system-wide:
 
 .. code-block:: bash
 
@@ -370,3 +428,9 @@ If not yet installed, the script will notify you about dependencies that
 need to be installed. The script requires specific versions of the
 dependencies. Older version than the ones mentioned in the release notes
 are likely not to be compatible to OCRmyPDF.
+
+
+Other Linux packages
+--------------------
+
+See the `Repology <https://repology.org/metapackage/ocrmypdf/versions>`_ page.

docs/introduction.rst

@@ -16,7 +16,7 @@ OCRmyPDF uses `Tesseract <https://github.com/tesseract-ocr/tesseract>`_, the bes
 About PDFs
 ----------
 
-PDFs are page description files that attempts to preserve a layout exactly. They can contain `vector graphic files <http://vector-conversions.com/vectorizing/raster_vs_vector.html>`_ that can contain raster objects such as scanned images. Because PDFs can contain multiple pages (unlike many image formats) and can contain fonts and text, it is a good formats for exchanging scanned documents.
+PDFs are page description files that attempts to preserve a layout exactly. They  contain `vector graphics <http://vector-conversions.com/vectorizing/raster_vs_vector.html>`_ that can contain raster objects such as scanned images. Because PDFs can contain multiple pages (unlike many image formats) and can contain fonts and text, it is a good formats for exchanging scanned documents.
 
 .. image:: bitmap_vs_svg.svg
 
@@ -42,15 +42,13 @@ PDF/A has a few drawbacks.  Some PDF viewers include an alert that the file is a
 What OCRmyPDF does
 ------------------
 
-OCRmyPDF analyzes each page of a PDF to determine the colorspace and resolution (DPI) needed to capture all of the information on that page without losing content.  It uses `Ghostscript <http://ghostscript.com/>`_ to rasterize the page, and then performs on OCR on the rasterized image.  It is not enough to simply extract the images from each page and run OCR on them individually.  Of course one could use Ghostscript or another PDF rasterizer and then pass the image to Tesseract.  OCRmyPDF automates this process and produces a minimally changed output file that contains the same information, colorspace and resolution.
+OCRmyPDF analyzes each page of a PDF to determine the colorspace and resolution (DPI) needed to capture all of the information on that page without losing content.  It uses `Ghostscript <http://ghostscript.com/>`_ to rasterize the page, and then performs on OCR on the rasterized image to create an OCR "layer". The layer is then grafted back onto the original PDF.
 
-The Tesseract OCR engine can output 'hOCR' files, which are XML files that contain a description of the text it found on the page.  OCRmyPDF will render a new PDF that contains only the hidden text layer, and merge this with the original page.
+While one can use a program like Ghostscript or ImageMagick to get an image and put the image through Tesseract, that actually creates a new PDF and many details may be lost. OCRmyPDF can produce a minimally changed PDF as output.
 
-Alternately, OCRmyPDF can use the Tesseract OCR engine to directly output PDFs for each page, then merge them.
+OCRmyPDF also some image processing options like deskew which improve the appearance of files and quality of OCR. When these are used, the OCR layer is grafted onto the processed image instead.
 
-By default, OCRmyPDF will convert the file to a PDF/A.  This behavior can be disabled with the ``--output-type pdf`` argument.
-
-Depending on the settings selected, OCRmyPDF may "graft" the OCR layer into the existing PDF, or reconstruct a visually equivalent new PDF.
+By default, OCRmyPDF produces archival PDFs – PDF/A, which are a stricter subset of PDF features designed for long term archives. If regular PDFs are desired, this can be disabled with ``--output-type pdf``.
 
 
 Why you shouldn't do this manually
@@ -81,10 +79,12 @@ OCRmyPDF is limited by the Tesseract OCR engine.  As such it experiences these l
 * It is not always good at analyzing the natural reading order of documents. For example, it may fail to recognize that a document contains two columns and join text across the columns.
 * Poor quality scans may produce poor quality OCR. Garbage in, garbage out.
 * PDFs that use transparent layers are not currently checked in the test suite, so they may not work correctly.
-  
+* It does not expose information about what font family text belongs to.
+
 OCRmyPDF is also limited by the PDF specification:
 
 * PDF encodes the position of text glyphs but does not encode document structure.  There is no markup that divides a document in sections, paragraphs, sentences, or even words (since blank spaces are not represented). As such all elements of document structure including the spaces between words must be derived heuristically.  Some PDF viewers do a better job of this than others.
+* Because some popular open source PDF viewers have a particularly hard time with spaces betweem words, OCRmyPDF appends a space to each text element as a workaround. While this mixes document structure with graphical information that ideally should be left to the PDF viewer to interpret, it improves compatibility with some viewers and does not cause problems for better ones.
 
 Ghostscript also imposes some limitations:
 
@@ -105,5 +105,11 @@ To the author's knowledge, OCRmyPDF is the most feature-rich and thoroughly test
 * pypdfocr
 * pdfbeads
 
-If you are looking for a micro web-frontend for OCRmyPDF, consider the third-party `OCRmyPDF-web <https://github.com/sseemayer/OCRmyPDF-web>`_. Bear in mind that OCRmyPDF is not designed to be secure against malware-bearing PDFs (see `Using OCRmyPDF online`_).
+Web front-ends
+--------------
+
+* `Nextcloud OCR <https://github.com/janis91/ocr>`_ is a free software plugin for the Nextcloud private cloud software
+* `OCRmyPDF-web <https://github.com/sseemayer/OCRmyPDF-web>`_, a micro web-frontend for OCRmyPDF (third-party, not actively maintained)
+
+Bear in mind that OCRmyPDF is not designed to be secure against malware-bearing PDFs (see `Using OCRmyPDF online`_).
 

docs/pipeline.svg

@@ -1,392 +1,553 @@
 <?xml version="1.0" encoding="UTF-8" standalone="no"?>
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  "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
-<!-- Generated by graphviz version 2.38.0 (20140413.2041)
+<!-- Generated by graphviz version 2.40.1 (20161225.0304)
  -->
 <!-- Title: Pipeline: Pages: 1 -->
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- viewBox="0.00 0.00 1544.00 1089.14" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
-<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 1085.14)">
+<svg width="1952pt" height="1277pt"
+ viewBox="0.00 0.00 1952.00 1277.18" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink">
+<g id="graph0" class="graph" transform="scale(1 1) rotate(0) translate(4 1273.1825)">
 <title>Pipeline:</title>
-<polygon fill="white" stroke="none" points="-4,4 -4,-1085.14 1540,-1085.14 1540,4 -4,4"/>
-<g id="clust1" class="cluster"><title>clustertasks</title>
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-<text text-anchor="middle" x="768" y="-1045.14" font-family="Times,serif" font-size="30.00" fill="#ff3232">Pipeline:</text>
+<polygon fill="#ffffff" stroke="transparent" points="-4,4 -4,-1273.1825 1948,-1273.1825 1948,4 -4,4"/>
+<g id="clust1" class="cluster">
+<title>clustertasks</title>
+<polygon fill="none" stroke="#000000" points="8,-8 8,-1261.1825 1936,-1261.1825 1936,-8 8,-8"/>
+<text text-anchor="middle" x="972" y="-1233.1825" font-family="Times,serif" font-size="30.00" fill="#ff3232">Pipeline:</text>
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-<!-- t9&#45;&gt;t10 -->
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-<!-- t10&#45;&gt;t14 -->
-<g id="edge25" class="edge"><title>t10&#45;&gt;t14</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="999.118,-326.405 988.677,-328.205 997.962,-333.309 999.118,-326.405"/>
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-<polyline fill="none" stroke="black" points="632.299,-266.173 632.299,-234.173 "/>
-<polyline fill="none" stroke="black" points="632.299,-266.173 636.299,-270.173 "/>
-<text text-anchor="middle" x="489" y="-246.173" font-family="Times,serif" font-size="20.00">ocrmypdf.pipeline.combine_layers</text>
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-<!-- t13&#45;&gt;t16 -->
-<g id="edge22" class="edge"><title>t13&#45;&gt;t16</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="509.048,-276.483 500.537,-270.174 503.256,-280.414 509.048,-276.483"/>
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-<!-- t15&#45;&gt;t16 -->
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-<!-- t11&#45;&gt;t12 -->
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-<polygon fill="#0044a0" stroke="#0044a0" points="873.983,-398.006 863.441,-399.063 872.341,-404.811 873.983,-398.006"/>
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-<!-- t11&#45;&gt;t14 -->
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-<!-- t12&#45;&gt;t16 -->
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+<g id="edge2" class="edge">
+<title>t1&#45;&gt;t2</title>
+<path fill="none" stroke="#0044a0" d="M774.5557,-1120.8306C775.4962,-1117.0421 776.5194,-1112.92 777.5618,-1108.7212"/>
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-<polygon fill="#efa03b" stroke="black" points="234.918,-156.426 480,-129.117 725.082,-156.426 724.853,-200.614 235.147,-200.614 234.918,-156.426"/>
-<polygon fill="none" stroke="black" points="230.903,-152.847 480,-125.09 729.097,-152.847 728.829,-204.616 231.171,-204.616 230.903,-152.847"/>
-<text text-anchor="middle" x="480" y="-162.639" font-family="Times,serif" font-size="20.00">ocrmypdf.pipeline.merge_pages_ghostscript</text>
+<g id="node22" class="node">
+<title>t20</title>
+<polygon fill="#efa03b" stroke="#000000" points="649.5156,-1020.2193 286.4844,-1020.2193 282.4844,-1016.2193 282.4844,-984.2193 645.5156,-984.2193 649.5156,-988.2193 649.5156,-1020.2193"/>
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+<text text-anchor="middle" x="466" y="-996.2193" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.generate_postscript_stub</text>
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-<!-- t16&#45;&gt;t20 -->
-<g id="edge33" class="edge"><title>t16&#45;&gt;t20</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="488.446,-214.253 483.87,-204.697 481.488,-215.021 488.446,-214.253"/>
+<!-- t1&#45;&gt;t20 -->
+<g id="edge31" class="edge">
+<title>t1&#45;&gt;t20</title>
+<path fill="none" stroke="#0044a0" d="M598.785,-1123.5822C563.105,-1117.7214 531.8209,-1109.8012 517,-1099.1825 493.9382,-1082.6593 480.4369,-1052.4741 473.1842,-1030.1561"/>
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-<!-- t16&#45;&gt;t21 -->
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-<polygon fill="#0044a0" stroke="#0044a0" points="771.206,-209.872 780.427,-204.653 769.964,-202.983 771.206,-209.872"/>
+<!-- t24 -->
+<g id="node24" class="node">
+<title>t24</title>
+<polygon fill="#efa03b" stroke="#000000" points="20.4213,-156.4247 242,-129.112 463.5787,-156.4247 463.3719,-200.6177 20.6281,-200.6177 20.4213,-156.4247"/>
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+<text text-anchor="middle" x="242" y="-162.6394" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.merge_pages_mupdf</text>
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-<!-- t14&#45;&gt;t20 -->
-<g id="edge34" class="edge"><title>t14&#45;&gt;t20</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="592.855,-204.63 582.26,-204.697 590.584,-211.251 592.855,-204.63"/>
+<!-- t1&#45;&gt;t24 -->
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+<title>t1&#45;&gt;t24</title>
+<path fill="none" stroke="#0044a0" d="M598.6617,-1124.8567C376.4578,-1103.9215 17,-1060.9746 17,-1002.2193 17,-1002.2193 17,-1002.2193 17,-335.7123 17,-276.266 68.2524,-235.5065 121.8346,-209.1377"/>
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-<!-- t14&#45;&gt;t21 -->
-<g id="edge38" class="edge"><title>t14&#45;&gt;t21</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="942.118,-215.294 943.828,-204.838 935.971,-211.946 942.118,-215.294"/>
+<!-- t23 -->
+<g id="node25" class="node">
+<title>t23</title>
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+<text text-anchor="middle" x="1218" y="-162.6394" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.merge_pages_qpdf</text>
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-<!-- t19&#45;&gt;t20 -->
-<g id="edge30" class="edge"><title>t19&#45;&gt;t20</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="350.595,-210.831 359.224,-204.683 348.645,-204.108 350.595,-210.831"/>
+<!-- t1&#45;&gt;t23 -->
+<g id="edge46" class="edge">
+<title>t1&#45;&gt;t23</title>
+<path fill="none" stroke="#0044a0" d="M941.3419,-1136.2202C1263.4143,-1128.3561 1927,-1100.2573 1927,-1002.2193 1927,-1002.2193 1927,-1002.2193 1927,-335.7123 1927,-234.7734 1651.3069,-194.7548 1443.7522,-178.9295"/>
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+<!-- t3 -->
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+<title>t3</title>
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-<!-- t17&#45;&gt;t20 -->
-<g id="edge32" class="edge"><title>t17&#45;&gt;t20</title>
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-<polygon fill="#0044a0" stroke="#0044a0" points="695.028,-202.903 684.581,-204.665 693.846,-209.802 695.028,-202.903"/>
+<!-- t2&#45;&gt;t3 -->
+<g id="edge3" class="edge">
+<title>t2&#45;&gt;t3</title>
+<path fill="none" stroke="#0044a0" d="M837.0145,-1046.7494C851.946,-1039.5987 868.2558,-1031.7881 882.9879,-1024.733"/>
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-<polygon fill="#0044a0" stroke="#0044a0" points="1056.99,-205.345 1046.42,-204.697 1054.28,-211.799 1056.99,-205.345"/>
+<!-- t4 -->
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+<title>t4</title>
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-<!-- t18&#45;&gt;t20 -->
-<g id="edge31" class="edge"><title>t18&#45;&gt;t20</title>
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+<!-- t3&#45;&gt;t4 -->
+<g id="edge4" class="edge">
+<title>t3&#45;&gt;t4</title>
+<path fill="none" stroke="#0044a0" d="M939.1114,-983.867C941.197,-979.6659 943.4863,-975.0549 945.8053,-970.3839"/>
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+<!-- t5 -->
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+</g>
+<!-- t4&#45;&gt;t5 -->
+<g id="edge5" class="edge">
+<title>t4&#45;&gt;t5</title>
+<path fill="none" stroke="#0044a0" d="M964,-909.7834C964,-904.5184 964,-898.8955 964,-893.4799"/>
+<polygon fill="#0044a0" stroke="#0044a0" points="967.5001,-893.4695 964,-883.4695 960.5001,-893.4695 967.5001,-893.4695"/>
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+<!-- t6 -->
+<g id="node7" class="node">
+<title>t6</title>
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+<!-- t4&#45;&gt;t6 -->
+<g id="edge7" class="edge">
+<title>t4&#45;&gt;t6</title>
+<path fill="none" stroke="#0044a0" d="M1072.6871,-909.8532C1097.768,-902.2558 1119.5887,-893.2079 1128,-883.252 1138.9559,-870.2843 1141.4763,-851.3696 1141.2475,-835.6545"/>
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+<!-- t5&#45;&gt;t6 -->
+<g id="edge6" class="edge">
+<title>t5&#45;&gt;t6</title>
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+<text text-anchor="middle" x="728" y="-743.252" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.rasterize_with_ghostscript</text>
+</g>
+<!-- t6&#45;&gt;t7 -->
+<g id="edge8" class="edge">
+<title>t6&#45;&gt;t7</title>
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+</g>
+<!-- t6&#45;&gt;t17 -->
+<g id="edge16" class="edge">
+<title>t6&#45;&gt;t17</title>
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+<title>t14</title>
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+<text text-anchor="middle" x="1565" y="-423.252" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.select_image_layer</text>
+</g>
+<!-- t6&#45;&gt;t14 -->
+<g id="edge22" class="edge">
+<title>t6&#45;&gt;t14</title>
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+<!-- t21 -->
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+<title>t21</title>
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+<text text-anchor="middle" x="1290" y="-246.1725" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.skip_page</text>
+</g>
+<!-- t6&#45;&gt;t21 -->
+<g id="edge28" class="edge">
+<title>t6&#45;&gt;t21</title>
+<path fill="none" stroke="#0044a0" d="M1269.322,-800.6326C1488.9576,-787.7851 1907,-754.9633 1907,-691.252 1907,-691.252 1907,-691.252 1907,-429.252 1907,-329.7211 1606.6136,-282.8737 1425.0278,-263.647"/>
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+<!-- t19 -->
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+<title>t19</title>
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+</g>
+<!-- t6&#45;&gt;t19 -->
+<g id="edge30" class="edge">
+<title>t6&#45;&gt;t19</title>
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+<!-- t8 -->
+<g id="node9" class="node">
+<title>t8</title>
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+</g>
+<!-- t7&#45;&gt;t8 -->
+<g id="edge9" class="edge">
+<title>t7&#45;&gt;t8</title>
+<path fill="none" stroke="#0044a0" d="M728,-731.2184C728,-727.5438 728,-723.5938 728,-719.6583"/>
+<polygon fill="#0044a0" stroke="#0044a0" points="731.5001,-719.4742 728,-709.4743 724.5001,-719.4743 731.5001,-719.4742"/>
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+<!-- t13 -->
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+<title>t13</title>
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+<text text-anchor="middle" x="481" y="-501.252" font-family="Times,serif" font-size="20.00" fill="#000000">ocrmypdf.pipeline.select_visible_page_image</text>
+</g>
+<!-- t7&#45;&gt;t13 -->
+<g id="edge20" class="edge">
+<title>t7&#45;&gt;t13</title>
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+<!-- t9 -->
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+<title>t9</title>
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+</g>
+<!-- t8&#45;&gt;t9 -->
+<g id="edge10" class="edge">
+<title>t8&#45;&gt;t9</title>
+<path fill="none" stroke="#0044a0" d="M691.9327,-673.2184C680.9122,-667.7081 668.6526,-661.5783 657.1104,-655.8072"/>
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+<!-- t8&#45;&gt;t13 -->
+<g id="edge19" class="edge">
+<title>t8&#45;&gt;t13</title>
+<path fill="none" stroke="#0044a0" d="M763.3121,-673.1037C771.2083,-667.2594 778.5531,-659.9847 783,-651.252 790.2604,-636.9942 792.214,-628.3326 783,-615.252 759.3602,-581.6921 662.7714,-550.9641 585.1057,-530.9385"/>
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+<!-- t10 -->
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+<title>t10</title>
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+</g>
+<!-- t9&#45;&gt;t10 -->
+<g id="edge11" class="edge">
+<title>t9&#45;&gt;t10</title>
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+<!-- t9&#45;&gt;t13 -->
+<g id="edge18" class="edge">
+<title>t9&#45;&gt;t13</title>
+<path fill="none" stroke="#0044a0" d="M593.2309,-615.1993C573.0988,-595.8356 540.6771,-564.6514 515.8453,-540.7673"/>
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+<!-- t11 -->
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+<title>t11</title>
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+</g>
+<!-- t10&#45;&gt;t11 -->
+<g id="edge12" class="edge">
+<title>t10&#45;&gt;t11</title>
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+<!-- t10&#45;&gt;t13 -->
+<g id="edge17" class="edge">
+<title>t10&#45;&gt;t13</title>
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+<!-- t12 -->
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+<title>t12</title>
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+</g>
+<!-- t11&#45;&gt;t12 -->
+<g id="edge13" class="edge">
+<title>t11&#45;&gt;t12</title>
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+<!-- t11&#45;&gt;t17 -->
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+<title>t11&#45;&gt;t17</title>
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+<!-- t12&#45;&gt;t15 -->
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+<title>t12&#45;&gt;t15</title>
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docs/release_notes.rst

@@ -5,6 +5,146 @@ OCRmyPDF uses `semantic versioning <http://semver.org/>`_ for its command line i
 
 The OCRmyPDF package itself does not contain a public API, although it is fairly stable and breaking changes are usually timed with a major release. A future release will clearly define the stable public API.
 
+.. Issue regex
+   find:    [^`]\#([0-9]{1,3})[^0-9]  
+   replace: `#$1 <https://github.com/jbarlow83/OCRmyPDF/issues/$1>`_
+
+v6.1.5
+------
+
+-   Fix issue `#253 <https://github.com/jbarlow83/OCRmyPDF/issues/248>`_, a possible division by zero when using the ``hocr`` renderer.
+
+-   Fix incorrectly formatted ``<xmp:ModifyDate>`` field inside XMP metadata for PDF/As.  veraPDF flags this as a PDF/A validation failure. The error is caused the timezone and final digit of the seconds of modified time to be omitted, so at worst the modification time stamp is rounded to the nearest 10 seconds.
+
+
+v6.1.4
+------
+
+-   Fix issue `#248 <https://github.com/jbarlow83/OCRmyPDF/issues/248>`_ ``--clean`` argument may remove OCR from left column of text on certain documents. We now set ``--layout none`` to suppress this.  
+
+-   The test cache was updated to reflect the change above.
+
+-   Change test suite to accommodate Ghostscript 9.23's new ability to insert JPEGs into PDFs without transcoding.
+
+-   XMP metadata in PDFs is now examined using ``defusedxml`` for safety.
+
+-   If an external process exits with a signal when asked to report its version, we now print the system error message instead of suppressing it.  This occurred when the required executable was found but was missing a shared library.
+
+-   qpdf 7.0.0 or newer is now required as the test suite can no longer pass without it.
+
+Notes
+~~~~~
+
+-   An apparent `regression in Ghostscript 9.23 <https://bugs.ghostscript.com/show_bug.cgi?id=699216>`_ will cause some ocrmypdf output files to become invalid in rare cases; the workaround for the moment is to set ``--force-ocr``.
+
+
+v6.1.3
+------
+
+-   Fix issue `#247 <https://github.com/jbarlow83/OCRmyPDF/issues/247>`_, ``/CreationDate`` metadata not copied from input to output.
+
+-   A warning is now issued when Python 3.5 is used on files with a large page count, as this case is known to regress to single core performance. The cause of this problem is unknown.
+
+
+v6.1.2
+------
+
+-   Upgrade to PyMuPDF v1.12.5 which includes a more complete fix to `#239 <https://github.com/jbarlow83/OCRmyPDF/issues/239>`_.
+
+-   Add ``defusedxml`` dependency.
+
+
+v6.1.1
+------
+
+-   Fix text being reported as found on all pages if PyMuPDF is not installed.
+
+
+v6.1.0
+------
+
+-   PyMuPDF is now an optional but recommended dependency, to alleviate installation difficulties on platforms that have less access to PyMuPDF than the author anticipated.  Install OCRmyPDF with ``pip install ocrmypdf[fitz]`` to use it to its full potential.
+
+-   Fix ``FileExistsError`` that could occur if OCR timed out while it was generating the output file. (`#218 <https://github.com/jbarlow83/OCRmyPDF/issues/218>`_)
+
+-   Fix table of contents/bookmarks all being redirected to page 1 when generating a PDF/A (with PyMuPDF).  (Without PyMuPDF the table of contents is removed in PDF/A mode.)
+
+-   Fix "RuntimeError: invalid key in dict" when table of contents/bookmarks titles contained the character ``)``. (`#239 <https://github.com/jbarlow83/OCRmyPDF/issues/239>`_)
+
+-   Added a new argument ``--skip-repair`` to skip the initial PDF repair step if the PDF is already well-formed (because another program repaired it).
+
+
+v6.0.0
+------
+
+-   The software license has been changed to GPLv3. Test resource files and some individual sources may have other licenses.
+
+-   OCRmyPDF now depends on `PyMuPDF <https://pymupdf.readthedocs.io/en/latest/installation/>`_. Including PyMuPDF is the primary reason for the change to GPLv3.
+
+-   Other backward incompatible changes
+
+    + The ``OCRMYPDF_TESSERACT``, ``OCRMYPDF_QPDF``, ``OCRMYPDF_GS`` and ``OCRMYPDF_UNPAPER`` environment variables are no longer used. Change ``PATH`` if you need to override the external programs OCRmyPDF uses.
+
+    + The ``ocrmypdf`` package has been moved to ``src/ocrmypdf`` to avoid issues with accidental import.
+
+    + The function ``ocrmypdf.exec.get_program`` was removed.
+
+    + The deprecated module ``ocrmypdf.pageinfo`` was removed.
+
+    + The ``--pdf-renderer tess4`` alias for ``sandwich`` was removed.
+
+-   Fixed an issue where OCRmyPDF failed to detect existing text on pages, depending on how the text and fonts were encoded within the PDF. (`#233 <https://github.com/jbarlow83/OCRmyPDF/issues/233>`_, `#232 <https://github.com/jbarlow83/OCRmyPDF/issues/232>`_)
+
+-   Fixed an issue that caused dramatic inflation of file sizes when ``--skip-text --output-type pdf`` was used. OCRmyPDF now removes duplicate resources such as fonts, images and other objects that it generates. (`#237 <https://github.com/jbarlow83/OCRmyPDF/issues/237>`_)
+
+-   Improved performance of the initial page splitting step. Originally this step was not believed to be expensive and ran in a process. Large file testing revealed it to be a bottleneck, so it is now parallelized. On a 700 page file with quad core machine, this change saves about 2 minutes. (`#234 <https://github.com/jbarlow83/OCRmyPDF/issues/234>`_)
+
+-   The test suite now includes a cache that can be used to speed up test runs across platforms. This also does not require computing checksums, so it's faster. (`#217 <https://github.com/jbarlow83/OCRmyPDF/issues/217>`_)
+
+
+v5.7.0
+------
+
+-   Fixed an issue that caused poor CPU utilization on machines more than 4 cores when running Tesseract 4. (Related to issue `#217 <https://github.com/jbarlow83/OCRmyPDF/issues/217>`_.)
+
+-   The 'hocr' renderer has been improved. The 'sandwich' and 'tesseract' renderers are still better for most use cases, but 'hocr' may be useful for people who work with the PDF.js renderer in English/ASCII languages. (`#225 <https://github.com/jbarlow83/OCRmyPDF/issues/225>`_)
+
+    + It now formats text in a matter that is easier for certain PDF viewers to select and extract copy and paste text. This should help macOS Preview and PDF.js in particular.
+    + The appearance of selected text and behavior of selecting text is improved.
+    + The PDF content stream now uses relative moves, making it more compact and easier for viewers to determine when two words on the same line.
+    + It can now deal with text on a skewed baseline.
+    + Thanks to @cforcey for the pull request, @jbreiden for many helpful suggestions, @ctbarbour for another round of improvements, and @acaloiaro for an independent review.
+
+v5.6.3
+------
+
+-   Suppress two debug messages that were too verbose
+
+
+v5.6.2
+------
+
+-   Development branch accidentally tagged as release. Do not use.
+
+
+v5.6.1
+------
+
+-   Fix issue `#219 <https://github.com/jbarlow83/OCRmyPDF/issues/219>`_: change how the final output file is created to avoid triggering permission errors when the output is a special file such as ``/dev/null``
+-   Fix test suite failures due to a qpdf 8.0.0 regression and Python 3.5's handling of symlink
+-   The "encrypted PDF" error message was different depending on the type of PDF encryption. Now a single clear message appears for all types of PDF encryption.
+-   ocrmypdf is now in Homebrew. Homebrew users are advised to the version of ocrmypdf in the official homebrew-core formulas rather than the private tap.
+-   Some linting
+
+
+v5.6.0
+------
+
+-   Fix issue `#216 <https://github.com/jbarlow83/OCRmyPDF/issues/216>`_: preserve "text as curves" PDFs without rasterizing file
+-   Related to the above, messages about rasterizing are more consistent
+-   For consistency versions minor releases will now get the trailing .0 they always should have had.
+
+
 v5.5
 ----
 
@@ -17,11 +157,11 @@ v5.5
 v5.4.4
 ------
 
--   Fix issue #181: fix final merge failure for PDFs with more pages than the system file handle limit (``ulimit -n``)
--   Fix issue #200: an uncommon syntax for formatting decimal numbers in a PDF would cause qpdf to issue a warning, which ocrmypdf treated as an error. Now this the warning is relayed.
+-   Fix issue `#181 <https://github.com/jbarlow83/OCRmyPDF/issues/181>`_: fix final merge failure for PDFs with more pages than the system file handle limit (``ulimit -n``)
+-   Fix issue `#200 <https://github.com/jbarlow83/OCRmyPDF/issues/200>`_: an uncommon syntax for formatting decimal numbers in a PDF would cause qpdf to issue a warning, which ocrmypdf treated as an error. Now this the warning is relayed.
 -   Fix an issue where intermediate PDFs would be created at version 1.3 instead of the version of the original file. It's possible but unlikely this had side effects.
--   A warning is now issued when older versions of qpdf are used since issues like #200 cause qpdf to infinite-loop
--   Address issue #140: if Tesseract outputs invalid UTF-8, escape it and print its message instead of aborting with a Unicode error 
+-   A warning is now issued when older versions of qpdf are used since issues like `#200 <https://github.com/jbarlow83/OCRmyPDF/issues/200>`_ cause qpdf to infinite-loop
+-   Address issue `#140 <https://github.com/jbarlow83/OCRmyPDF/issues/140>`_: if Tesseract outputs invalid UTF-8, escape it and print its message instead of aborting with a Unicode error 
 -   Adding previously unlisted setup requirement, pytest-runner
 -   Update documentation: fix an error in the example script for Synology with Docker images, improved security guidance, advised ``pip install --user``
 
@@ -79,9 +219,9 @@ v5.3.1
 v5.3
 ----
 
--   Added ``--user-words`` and ``--user-patterns`` arguments which are forwarded to Tesseract OCR as words and regular expressions respective to use to guide OCR. Supplying a list of subject-domain words should assist Tesseract with resolving words. (#165)
--   Using a non Latin-1 language with the "hocr" renderer now warns about possible OCR quality and recommends workarounds (#176)
--   Output file path added to error message when that location is not writable (#175)
+-   Added ``--user-words`` and ``--user-patterns`` arguments which are forwarded to Tesseract OCR as words and regular expressions respective to use to guide OCR. Supplying a list of subject-domain words should assist Tesseract with resolving words. (`#165 <https://github.com/jbarlow83/OCRmyPDF/issues/165>`_)
+-   Using a non Latin-1 language with the "hocr" renderer now warns about possible OCR quality and recommends workarounds (`#176 <https://github.com/jbarlow83/OCRmyPDF/issues/176>`_)
+-   Output file path added to error message when that location is not writable (`#175 <https://github.com/jbarlow83/OCRmyPDF/issues/175>`_)
 -   Otherwise valid PDFs with leading whitespace at the beginning of the file are now accepted
 
 
@@ -102,7 +242,7 @@ v5.1
 v5.0.1
 ------
 
--   Fixed issue #169, exception due to failure to create sidecar text files on some versions of Tesseract 3.04, including the jbarlow83/ocrmypdf Docker image
+-   Fixed issue `#169 <https://github.com/jbarlow83/OCRmyPDF/issues/169>`_, exception due to failure to create sidecar text files on some versions of Tesseract 3.04, including the jbarlow83/ocrmypdf Docker image
 
 
 v5.0
@@ -114,33 +254,33 @@ v5.0
      + Support for Tesseract 3.02 and 3.03 dropped. Tesseract 3.04 or newer is required. Tesseract 4.00 (alpha) is supported.
      + The OCRmyPDF.sh script was removed.
 
--   Add a new feature, ``--sidecar``, which allows creating "sidecar" text files which contain the OCR results in plain text. These OCR text is more reliable than extracting text from PDFs. Closes #126.
--   New feature: ``--pdfa-image-compression``, which allows overriding Ghostscript's lossy-or-lossless image encoding heuristic and making all images JPEG encoded or lossless encoded as desired. Fixes #163.
--   Fixed issue #143, added ``--quiet`` to suppress "INFO" messages
--   Fixed issue #164, a typo
+-   Add a new feature, ``--sidecar``, which allows creating "sidecar" text files which contain the OCR results in plain text. These OCR text is more reliable than extracting text from PDFs. Closes `#126 <https://github.com/jbarlow83/OCRmyPDF/issues/126>`_.
+-   New feature: ``--pdfa-image-compression``, which allows overriding Ghostscript's lossy-or-lossless image encoding heuristic and making all images JPEG encoded or lossless encoded as desired. Fixes `#163 <https://github.com/jbarlow83/OCRmyPDF/issues/163>`_.
+-   Fixed issue `#143 <https://github.com/jbarlow83/OCRmyPDF/issues/143>`_, added ``--quiet`` to suppress "INFO" messages
+-   Fixed issue `#164 <https://github.com/jbarlow83/OCRmyPDF/issues/164>`_, a typo
 -   Removed the command line parameters ``-n`` and ``--just-print`` since they have not worked for some time (reported as Ubuntu bug `#1687308 <https://bugs.launchpad.net/ubuntu/+source/ocrmypdf/+bug/1687308>`_)
 
 
 v4.5.6
 ------
 
--   Fixed issue #156, 'NoneType' object has no attribute 'getObject' on pages with no optional /Contents record.  This should resolve all issues related to pages with no /Contents record.
--   Fixed issue #158, ocrmypdf now stops and terminates if Ghostscript fails on an intermediate step, as it is not possible to proceed.
--   Fixed issue #160, exception thrown on certain invalid arguments instead of error message
+-   Fixed issue `#156 <https://github.com/jbarlow83/OCRmyPDF/issues/156>`_, 'NoneType' object has no attribute 'getObject' on pages with no optional /Contents record.  This should resolve all issues related to pages with no /Contents record.
+-   Fixed issue `#158 <https://github.com/jbarlow83/OCRmyPDF/issues/158>`_, ocrmypdf now stops and terminates if Ghostscript fails on an intermediate step, as it is not possible to proceed.
+-   Fixed issue `#160 <https://github.com/jbarlow83/OCRmyPDF/issues/160>`_, exception thrown on certain invalid arguments instead of error message
 
 
 v4.5.5
 ------
 
 -   Automated update of macOS homebrew tap
--   Fixed issue #154, KeyError '/Contents' when searching for text on blank pages that have no /Contents record.  Note: incomplete fix for this issue.
+-   Fixed issue `#154 <https://github.com/jbarlow83/OCRmyPDF/issues/154>`_, KeyError '/Contents' when searching for text on blank pages that have no /Contents record.  Note: incomplete fix for this issue.
 
 
 v4.5.4
 ------
 
--   Fix ``--skip-big`` raising an exception if a page contains no images (#152) (thanks to @TomRaz)
--   Fix an issue where pages with no images might trigger "cannot write mode P as JPEG" (#151)
+-   Fix ``--skip-big`` raising an exception if a page contains no images (`#152 <https://github.com/jbarlow83/OCRmyPDF/issues/152>`_) (thanks to @TomRaz)
+-   Fix an issue where pages with no images might trigger "cannot write mode P as JPEG" (`#151 <https://github.com/jbarlow83/OCRmyPDF/issues/151>`_)
 
 
 v4.5.3
@@ -155,7 +295,7 @@ v4.5.3
 v4.5.2
 ------
 
--   Fix issue #147. ``--pdf-renderer tess4 --clean`` will produce an oversized page containing the original image in the bottom left corner, due to loss DPI information.
+-   Fix issue `#147 <https://github.com/jbarlow83/OCRmyPDF/issues/147>`_. ``--pdf-renderer tess4 --clean`` will produce an oversized page containing the original image in the bottom left corner, due to loss DPI information.
 -   Make "using Tesseract 4.0" warning less ominous
 -   Set up machinery for homebrew OCRmyPDF tap
 
@@ -163,13 +303,13 @@ v4.5.2
 v4.5.1
 ------
 
--   Fix issue #137, proportions of images with a non-square pixel aspect ratio would be distorted in output for ``--force-ocr`` and some other combinations of flags
+-   Fix issue `#137 <https://github.com/jbarlow83/OCRmyPDF/issues/137>`_, proportions of images with a non-square pixel aspect ratio would be distorted in output for ``--force-ocr`` and some other combinations of flags
 
 
 v4.5
 ----
 
--   Exotic PDFs containing "Form XObjects" are now supported (issue #134; PDF reference manual 8.10), and images they contain are taken into account when determining the resolution for rasterizing
+-   Exotic PDFs containing "Form XObjects" are now supported (issue `#134 <https://github.com/jbarlow83/OCRmyPDF/issues/134>`_; PDF reference manual 8.10), and images they contain are taken into account when determining the resolution for rasterizing
 -   The Tesseract 4 Docker image no longer includes all languages, because it took so long to build something would tend to fail
 -   OCRmyPDF now warns about using ``--pdf-renderer tesseract`` with Tesseract 3.04 or lower due to issues with Ghostscript corrupting the OCR text in these cases
 
@@ -262,14 +402,14 @@ v4.3
 v4.2.5
 ------
 
--   Fixed an issue (#100) with PDFs that omit the optional /BitsPerComponent parameter on images
+-   Fixed an issue (`#100 <https://github.com/jbarlow83/OCRmyPDF/issues/100>`_) with PDFs that omit the optional /BitsPerComponent parameter on images
 -   Removed non-free file milk.pdf
 
 
 v4.2.4
 ------
 
--   Fixed an error (#90) caused by PDFs that use stencil masks properly
+-   Fixed an error (`#90 <https://github.com/jbarlow83/OCRmyPDF/issues/90>`_) caused by PDFs that use stencil masks properly
 -   Fixed handling of PDFs that try to draw images or stencil masks without properly setting up the graphics state (such images are now ignored for the purposes of calculating DPI)
 
 v4.2.3
@@ -302,7 +442,7 @@ v4.2.1
 v4.2
 ----
 
--   ocrmypdf will now try to convert single image files to PDFs if they are provided as input (#15)
+-   ocrmypdf will now try to convert single image files to PDFs if they are provided as input (`#15 <https://github.com/jbarlow83/OCRmyPDF/issues/15>`_)
 
     +  This is a basic convenience feature. It only supports a single image and always makes the image fill the whole page.
     +  For better control over image to PDF conversion, use ``img2pdf`` (one of ocrmypdf's dependencies)
@@ -318,9 +458,9 @@ v4.2
 
     +  supports users who want to use OCRmyPDF to reconstruct text information in PDFs with damaged Unicode maps (copy and paste text does not match displayed text)
     +  supports reinterpreting PDFs where text was rendered as curves for printing, and text needs to be recovered
-    +  fixes issue #82
+    +  fixes issue `#82 <https://github.com/jbarlow83/OCRmyPDF/issues/82>`_
 
--   Fixes an issue where, with certain settings, monochrome images in PDFs would be converted to 8-bit grayscale, increasing file size (#79)
+-   Fixes an issue where, with certain settings, monochrome images in PDFs would be converted to 8-bit grayscale, increasing file size (`#79 <https://github.com/jbarlow83/OCRmyPDF/issues/79>`_)
 -   Support for Ubuntu 12.04 LTS "precise" has been dropped in favor of (roughly) Ubuntu 14.04 LTS "trusty" 
 
     +  Some Ubuntu "PPAs" (backports) are needed to make it work
@@ -436,7 +576,7 @@ New features
 
 -   Automatic page rotation (``-r``) is now available. It uses ignores any prior rotation information
     on PDFs and sets rotation based on the dominant orientation of detectable text. This feature is
-    fairly reliable but some false positives occur especially if there is not much text to work with. (#4) 
+    fairly reliable but some false positives occur especially if there is not much text to work with. (`#4 <https://github.com/jbarlow83/OCRmyPDF/issues/4>`_) 
 -   Deskewing is now performed using Leptonica instead of unpaper. Leptonica is faster and more reliable
     at image deskewing than unpaper.
 
@@ -447,14 +587,14 @@ Fixes
 -   Fixed an issue where lossless reconstruction could cause some pages to be appear incorrectly
     if the page was rotated by the user in Acrobat after being scanned (specifically if it a /Rotate tag)
 -   Fixed an issue where lossless reconstruction could misalign the graphics layer with respect to
-    text layer if the page had been cropped such that its origin is not (0, 0) (#49)
+    text layer if the page had been cropped such that its origin is not (0, 0) (`#49 <https://github.com/jbarlow83/OCRmyPDF/issues/49>`_)
 
 
 Changes
 ^^^^^^^
 
 -   Logging output is now much easier to read
--   ``--deskew`` is now performed by Leptonica instead of unpaper (#25)
+-   ``--deskew`` is now performed by Leptonica instead of unpaper (`#25 <https://github.com/jbarlow83/OCRmyPDF/issues/25>`_)
 -   libffi is now required
 -   Some changes were made to the Docker and Travis build environments to support libffi
 -   ``--pdf-renderer=tesseract`` now displays a warning if the Tesseract version is less than 3.04.01,
@@ -469,7 +609,7 @@ v3.2.1
 Changes
 ^^^^^^^
 
--   Fixed issue #47 "convert() got and unexpected keyword argument 'dpi'" by upgrading to img2pdf 0.2
+-   Fixed issue `#47 <https://github.com/jbarlow83/OCRmyPDF/issues/47>`_ "convert() got and unexpected keyword argument 'dpi'" by upgrading to img2pdf 0.2
 -   Tweaked the Dockerfiles
 
 
@@ -513,7 +653,7 @@ Changes
 -   Python 3.5 and macOS El Capitan are now supported platforms - no changes were
     needed to implement support
 -   Improved some error messages related to missing input files
--   Fixed issue #20 - uppercase .PDF extension not accepted
+-   Fixed issue `#20 <https://github.com/jbarlow83/OCRmyPDF/issues/20>`_ - uppercase .PDF extension not accepted
 -   Fixed an issue where OCRmyPDF failed to text that certain pages contained previously OCR'ed text, 
     such as OCR text produced by Tesseract 3.04
 -   Inserts /Creator tag into PDFs so that errors can be traced back to this project
@@ -590,14 +730,14 @@ Release candidates
 
 -   rc9:
 
-    - fix issue #118: report error if ghostscript iccprofiles are missing
-    - fixed another issue related to #111: PDF rasterized to palette file
+    - fix issue `#118 <https://github.com/jbarlow83/OCRmyPDF/issues/118>`_: report error if ghostscript iccprofiles are missing
+    - fixed another issue related to `#111 <https://github.com/jbarlow83/OCRmyPDF/issues/111>`_: PDF rasterized to palette file
     - add support image files with a palette
     - don't try to validate PDF file after an exception occurs
 
 -   rc8:
 
-    - fix issue #111: exception thrown if PDF is missing DocumentInfo dictionary
+    - fix issue `#111 <https://github.com/jbarlow83/OCRmyPDF/issues/111>`_: exception thrown if PDF is missing DocumentInfo dictionary
 
 -   rc7:
 

docs/security.rst

@@ -30,14 +30,16 @@ Depending on the options specified, OCRmyPDF may graft the OCR layer into the ex
 Using OCRmyPDF online or as a service
 -------------------------------------
 
-OCRmyPDF should not be deployed as a public-facing service, like a website where a potential attacker could upload a PDF of their choice for OCR. OCRmyPDF is not designed to be secure against PDF malware. Another concern is PDFs specifically designed to be a denial of service attack: PDFs can contain recursive data structures that sometimes send parsers into infinite loops, and issue complex graphics drawing commands.
+OCRmyPDF should not be deployed as a public-facing service, such as a website where a potential attacker could upload a PDF of their choice for OCR. OCRmyPDF is not designed to be secure against PDF malware. Another concern is PDFs specifically designed to be a denial of service attack: PDFs can contain recursive data structures that sometimes send parsers into infinite loops, and issue complex graphics drawing commands.
+
+Setting aside these concerns, a side effect of OCRmyPDF is it may incidentally sanitize PDFs that contain malware. It runs ``qpdf`` to repair the PDF, which could correct malformed PDF structures that are part of an attack. When PDF/A output is selected (the default), the input PDF is partially reconstructed by Ghostscript. When ``--force-ocr`` is used, all pages are rasterized and reconverted to PDF, which could remove malware in embedded images. No guarantees.
 
 OCRmyPDF should be relatively safe to use in a trusted intranet, with some considerations:
 
 Limiting CPU usage
 ^^^^^^^^^^^^^^^^^^
 
-OCRmyPDF will attempt to use all available CPUs and storage, so executing ``nice ocrmypdf`` or limiting the number of jobs with the ``-j`` argument may ensure the server remains available. Another option would be run OCRmyPDF jobs inside a Docker container or virtual machine, which can impose its own limits on CPU usage.
+OCRmyPDF will attempt to use all available CPUs and storage, so executing ``nice ocrmypdf`` or limiting the number of jobs with the ``-j`` argument may ensure the server remains available. Another option would be run OCRmyPDF jobs inside a Docker container, a virtual machine, or a cloud instance, which can impose its own limits on CPU usage and be terminated "from orbit" if it fails to complete.
 
 Temporary storage requirements
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
@@ -46,7 +48,7 @@ OCRmyPDF will use a large amount of temporary storage for its work, proportional
 
 To check temporary storage usage on actual files, run ``ocrmypdf -k ...`` which will preserve and print the path to temporary storage when the job is done.
 
-To change where temporary files are stored, change the ``TMPDIR`` environment variable for ocrmypdf's environment. (Python's ``tempfile.gettempdir()`` returns the root directory in which temporary files will be stored.)
+To change where temporary files are stored, change the ``TMPDIR`` environment variable for ocrmypdf's environment. (Python's ``tempfile.gettempdir()`` returns the root directory in which temporary files will be stored.) For example, one could redirect ``TMPDIR`` to a large RAM disk to avoid wear on HDD/SSD and potentially improve performance. On Amazon Web Services, ``TMPDIR`` can be set to `empheral storage <https://docs.aws.amazon.com/AWSEC2/latest/UserGuide/InstanceStorage.html>`_.
 
 Timeouts
 ^^^^^^^^
@@ -64,7 +66,13 @@ Abbyy Cloud OCR is a viable commercial alternative with a web services API.
 Password protection, digital signatures and certification
 ---------------------------------------------------------
 
-OCRmyPDF cannot remove password protection from a PDF. ``qpdf``, one of its dependencies, has this capability. After OCR is applied, password protection is not permitted on PDF/A documents but the file can be converted to regular PDF.
+Password protected PDFs usually have two passwords, and owner and user password. When the user password is set to empty, PDF readers will open the file automatically and marked it as "(SECURED)". While not as reliable as a digital signature, this indicates that whoever set the password approved of the file at that time. When the user password is set, the document cannot be viewed without the password. 
+
+Either way, OCRmyPDF does not remove passwords from PDFs and exits with an error on encountering them.
+
+``qpdf``, one of OCRmyPDF's dependencies, can remove passwords. If the owner and user password are set, a password is required for ``qpdf``. If only the owner password is set, then the password can be stripped, even if one does not have the owner password.
+
+After OCR is applied, password protection is not permitted on PDF/A documents but the file can be converted to regular PDF.
 
 Many programs exist which are capable of inserting an image of someone's signature. On its own, this offers no security guarantees. It is trivial to remove the signature image and apply it to other files. This practice offers no real security.
 

ocrmypdf/__init__.py

@@ -1,10 +0,0 @@
-# © 2017 James R. Barlow: github.com/jbarlow83
-
-import pkg_resources
-
-PROGRAM_NAME = 'ocrmypdf'
-
-# Official PEP 396
-__version__ = pkg_resources.get_distribution('ocrmypdf').version
-
-VERSION = __version__

ocrmypdf/exec/__init__.py

@@ -1,49 +0,0 @@
-#!/usr/bin/env python3
-# © 2016 James R. Barlow: github.com/jbarlow83
-
-"""Wrappers to manage subprocess calls"""
-
-import os
-import re
-import sys
-from subprocess import run, STDOUT, PIPE, CalledProcessError
-from ..exceptions import MissingDependencyError
-
-
-def get_program(name):
-    "Check environment variables for overrides to this program"
-    envvar = 'OCRMYPDF_' + name.upper()
-    return os.environ.get(envvar, name)
-
-
-def get_version(program, *, 
-        version_arg='--version', regex=r'(\d+(\.\d+)*)'):
-    "Get the version of the specified program, "
-    args_prog = [
-        get_program(program),
-        version_arg
-    ]
-    try:
-        proc = run(
-            args_prog, close_fds=True, universal_newlines=True,
-            stdout=PIPE, stderr=STDOUT, check=True)
-        output = proc.stdout
-    except CalledProcessError as e:
-        if get_program(program) == program:
-            raise MissingDependencyError(
-                "Could not find program '{}' on the PATH".format(
-                    program)) from e
-        else:
-            raise MissingDependencyError(
-                "Could not find program '{}'".format(
-                    get_program(program))) from e            
-
-    try:
-        version = re.match(regex, output.strip()).group(1)
-    except AttributeError as e:
-        raise MissingDependencyError(
-            ("The program '{}' did not report its version. "
-            "Message was:\n{}").format(program, output)
-        )
-
-    return version

ocrmypdf/lib/__init__.py

@@ -1,2 +0,0 @@
-"""Bindings to external libraries"""
-# © 2017 James R. Barlow: github.com/jbarlow83

ocrmypdf/pageinfo.py

@@ -1,538 +0,0 @@
-#!/usr/bin/env python3
-# © 2015 James R. Barlow: github.com/jbarlow83
-
-from subprocess import Popen, PIPE
-from decimal import Decimal
-from math import hypot, isclose
-import re
-import sys
-import PyPDF2 as pypdf
-from collections import namedtuple
-import warnings
-
-
-warnings.warn("ocrmypdf.pageinfo is deprecated'; use ocrmypdf.pdfinfo",
-              DeprecationWarning)
-
-matrix_mult = pypdf.pdf.utils.matrixMultiply
-
-FRIENDLY_COLORSPACE = {
-    '/DeviceGray': 'gray',
-    '/CalGray': 'gray',
-    '/DeviceRGB': 'rgb',
-    '/CalRGB': 'rgb',
-    '/DeviceCMYK': 'cmyk',
-    '/Lab': 'lab',
-    '/ICCBased': 'icc',
-    '/Indexed': 'index',
-    '/Separation': 'sep',
-    '/DeviceN': 'devn',
-    '/Pattern': '-',
-    '/G': 'gray',  # Abbreviations permitted in inline images
-    '/RGB': 'rgb',
-    '/CMYK': 'cmyk',
-    '/I': 'index',
-}
-
-FRIENDLY_ENCODING = {
-    '/CCITTFaxDecode': 'ccitt',
-    '/DCTDecode': 'jpeg',
-    '/JPXDecode': 'jpx',
-    '/JBIG2Decode': 'jbig2',
-    '/CCF': 'ccitt',  # Abbreviations permitted in inline images
-    '/DCT': 'jpeg',
-    '/AHx': 'asciihex',
-    '/A85': 'ascii85',
-    '/LZW': 'lzw',
-    '/Fl': 'flate',
-    '/RL': 'runlength'
-}
-
-FRIENDLY_COMP = {
-    'gray': 1,
-    'rgb': 3,
-    'cmyk': 4,
-    'lab': 3,
-    'index': 1
-}
-
-
-UNIT_SQUARE = (1.0, 0.0, 0.0, 1.0, 0.0, 0.0)
-
-
-def _matrix_from_shorthand(shorthand):
-    """Convert from PDF matrix shorthand to full matrix
-
-    PDF 1.7 spec defines a shorthand for describing the entries of a matrix
-    since the last column is always (0, 0, 1).
-    """
-
-    a, b, c, d, e, f = map(float, shorthand)
-    return ((a, b, 0),
-            (c, d, 0),
-            (e, f, 1))
-
-
-def _shorthand_from_matrix(matrix):
-    """Convert from transformation matrix to PDF shorthand."""
-    a, b = matrix[0][0], matrix[0][1]
-    c, d = matrix[1][0], matrix[1][1]
-    e, f = matrix[2][0], matrix[2][1]
-    return tuple(map(float, (a, b, c, d, e, f)))
-
-
-def _is_unit_square(shorthand):
-    values = map(float, shorthand)
-    pairwise = zip(values, UNIT_SQUARE)
-    return all([isclose(a, b, rel_tol=1e-3) for a, b in pairwise])
-
-XobjectSettings = namedtuple('XobjectSettings',
-    ['name', 'shorthand', 'stack_depth'])
-
-InlineSettings = namedtuple('InlineSettings',
-    ['settings', 'shorthand', 'stack_depth'])
-
-ContentsInfo = namedtuple('ContentsInfo', ['xobject_settings', 'inline_images'])
-
-
-def _normalize_stack(operations):
-    """Fix runs of qQ's in the stack
-
-    For some reason PyPDF2 converts runs of qqq, QQ, QQQq, etc. into single
-    operations.  Break this silliness up and issue each stack operation
-    individually so we don't lose count.
-
-    """
-    for operands, command in operations:
-        if re.match(br'Q*q+$', command):   # Zero or more Q, one or more q
-            for char in command:           # Split into individual bytes
-                yield ([], bytes([char]))  # Yield individual bytes
-        else:
-            yield (operands, command)
-
-
-def _interpret_contents(contentstream, initial_shorthand=UNIT_SQUARE):
-    """Interpret the PDF content stream
-
-    The stack represents the state of the PDF graphics stack.  We are only
-    interested in the current transformation matrix (CTM) so we only track
-    this object; a full implementation would need to track many other items.
-
-    The CTM is initialized to the mapping from user space to device space.
-    PDF units are 1/72".  In a PDF viewer or printer this matrix is initialized
-    to the transformation to device space.  For example if set to
-    (1/72, 0, 0, 1/72, 0, 0) then all units would be calculated in inches.
-
-    Images are always considered to be (0, 0) -> (1, 1).  Before drawing an
-    image there should be a 'cm' that sets up an image coordinate system
-    where drawing from (0, 0) -> (1, 1) will draw on the desired area of the
-    page.
-
-    PDF units suit our needs so we initialize ctm to the identity matrix.
-
-    PyPDF2 replaces inline images with a fake "INLINE IMAGE" operator.
-
-    """
-
-    operations = contentstream.operations
-    stack = []
-    ctm = _matrix_from_shorthand(initial_shorthand)
-    xobject_settings = []
-    inline_images = []
-
-    for n, op in enumerate(_normalize_stack(operations)):
-        operands, command = op
-        if command == b'q':
-            stack.append(ctm)
-            if len(stack) > 32:
-                raise RuntimeError(
-                    "PDF graphics stack overflow, command %i" % n)
-        elif command == b'Q':
-            try:
-                ctm = stack.pop()
-            except IndexError:
-                raise RuntimeError(
-                    "PDF graphics stack underflow, command %i" % n)
-        elif command == b'cm':
-            ctm = matrix_mult(
-                _matrix_from_shorthand(operands), ctm)
-        elif command == b'Do':
-            image_name = operands[0]
-            settings = XobjectSettings(
-                name=image_name, shorthand=_shorthand_from_matrix(ctm),
-                stack_depth=len(stack))
-            xobject_settings.append(settings)
-        elif command == b'INLINE IMAGE':
-            settings = operands['settings']
-            inline = InlineSettings(
-                settings=settings, shorthand=_shorthand_from_matrix(ctm),
-                stack_depth=len(stack))
-            inline_images.append(inline)
-
-    return ContentsInfo(
-        xobject_settings=xobject_settings,
-        inline_images=inline_images)
-
-
-def _get_dpi(ctm_shorthand, image_size):
-    """Given the transformation matrix and image size, find the image DPI.
-
-    PDFs do not include image resolution information within image data.
-    Instead, the PDF page content stream describes the location where the
-    image will be rasterized, and the effective resolution is the ratio of the
-    pixel size to raster target size.
-
-    Normally a scanned PDF has the paper size set appropriately but this is
-    not guaranteed. The most common case is a cropped image will change the
-    page size (/CropBox) without altering the page content stream. That means
-    it is not sufficient to assume that the image fills the page, even though
-    that is the most common case.
-
-    A PDF image may be scaled (always), cropped, translated, rotated in place
-    to an arbitrary angle (rarely) and skewed. Only equal area mappings can
-    be expressed, that is, it is not necessary to consider distortions where
-    the effective DPI varies with position.
-
-    To determine the image scale, transform an offset axis vector v0 (0, 0),
-    width-axis vector v0 (1, 0), height-axis vector vh (0, 1) with the matrix,
-    which gives the dimensions of the image in PDF units. From there we can
-    compare to actual image dimensions. PDF uses
-    row vector * matrix_tranposed unlike the traditional
-    matrix * column vector.
-
-    The offset, width and height vectors can be combined in a matrix and
-    multiplied by the transform matrix. Then we want to calculated
-        magnitude(width_vector - offset_vector)
-    and
-        magnitude(height_vector - offset_vector)
-
-    When the above is worked out algebraically, the effect of translation
-    cancels out, and the vector magnitudes become functions of the nonzero
-    transformation matrix indices. The results of the derivation are used
-    in this code.
-
-    pdfimages -list does calculate the DPI in some way that is not completely
-    naive, but it does not get the DPI of rotated images right, so cannot be
-    used anymore to validate this. Photoshop works, or using Acrobat to
-    rotate the image back to normal.
-
-    It does not matter if the image is partially cropped, or even out of the
-    /MediaBox.
-
-    """
-
-    a, b, c, d, _, _ = ctm_shorthand
-
-    # Calculate the width and height of the image in PDF units
-    image_drawn_width = hypot(a, b)
-    image_drawn_height = hypot(c, d)
-
-    # The scale of the image is pixels per PDF unit (1/72")
-    scale_w = image_size[0] / image_drawn_width
-    scale_h = image_size[1] / image_drawn_height
-
-    # DPI = scale * 72
-    dpi_w = scale_w * 72.0
-    dpi_h = scale_h * 72.0
-
-    return (dpi_w, dpi_h)
-
-
-def _find_inline_images(contentsinfo):
-    "Find inline images in the contentstream"
-
-    for n, inline in enumerate(contentsinfo.inline_images):
-        image = {}
-        image['name'] = str('inline-%02d' % n)
-        image['width'] = inline.settings['/W']
-        image['height'] = inline.settings['/H']
-        if '/BPC' in inline.settings:
-            image['bpc'] = inline.settings['/BPC']
-        else:
-            image['bpc'] = 8
-        if '/CS' in inline.settings:
-            image['color'] = FRIENDLY_COLORSPACE.get(inline.settings['/CS'], '-')
-        else:
-            image['color'] = '-'
-        image['comp'] = FRIENDLY_COMP.get(image['color'], '?')
-        if '/F' in inline.settings:
-            filter_ = inline.settings['/F']
-            if isinstance(filter_, pypdf.generic.ArrayObject):
-                filter_ = filter_[0]
-            image['enc'] = FRIENDLY_ENCODING.get(filter_, 'image')
-        else:
-            image['enc'] = 'image'
-
-        dpi_w, dpi_h = _get_dpi(
-            inline.shorthand, (image['width'], image['height']))
-        image['dpi_w'], image['dpi_h'] = Decimal(dpi_w), Decimal(dpi_h)
-        yield image
-
-
-def _image_xobjects(container):
-    """Search for all XObject-based images in the container
-
-    Usually the container is a page, but it could also be a Form XObject
-    that contains images. Filter out the Form XObjects which are dealt with
-    elsewhere.
-
-    Generate a sequence of tuples (image, xobj container), where container,
-    where xobj is the name of the object and image is the object itself,
-    since the object does not know its own name.
-
-    """
-
-    if '/Resources' not in container:
-        return
-    resources = container['/Resources']
-    if '/XObject' not in resources:
-        return
-    for xobj in resources['/XObject']:
-        candidate = resources['/XObject'][xobj]
-        if candidate['/Subtype'] == '/Image':
-            image = candidate
-            yield (image, xobj)
-
-
-def _find_regular_images(container, contentsinfo):
-    """Find images stored in the container's /Resources /XObject
-
-    Usually the container is a page, but it could also be a Form XObject
-    that contains images.
-
-    Generates images with their DPI at time of drawing.
-
-    """
-
-    for pdfimage, xobj in _image_xobjects(container):
-        image = {}
-        image['name'] = xobj
-        image['width'] = pdfimage['/Width']
-        image['height'] = pdfimage['/Height']
-        if '/BitsPerComponent' in pdfimage:
-            image['bpc'] = pdfimage['/BitsPerComponent']
-        else:
-            image['bpc'] = 8
-
-        # Fixme: this is incorrectly treats explicit masks as stencil masks,
-        # but good enough for now. Explicit masks have /ImageMask true but are
-        # never called for in content stream, instead are drawn as a /Mask on
-        # other images. For our purposes finding out the details of /Mask
-        # will seldom matter.
-        if '/ImageMask' in pdfimage:
-            image['type'] = 'stencil' if pdfimage['/ImageMask'].value \
-                            else 'image'
-        else:
-            image['type'] = 'image'
-        if '/Filter' in pdfimage:
-            filter_ = pdfimage['/Filter']
-            if isinstance(filter_, pypdf.generic.ArrayObject):
-                filter_ = filter_[0]
-            image['enc'] = FRIENDLY_ENCODING.get(filter_, 'image')
-        else:
-            image['enc'] = 'image'
-        if '/ColorSpace' in pdfimage:
-            cs = pdfimage['/ColorSpace']
-            if isinstance(cs, pypdf.generic.ArrayObject):
-                cs = cs[0]
-            image['color'] = FRIENDLY_COLORSPACE.get(cs, '-')
-        else:
-            image['color'] = 'jpx' if image['enc'] == 'jpx' else '?'
-
-        image['comp'] = FRIENDLY_COMP.get(image['color'], '?')
-
-        # Bit of a hack... infer grayscale if component count is uncertain
-        # but encoding must be monochrome. This happens if a monochrome image
-        # has an ICC profile attached. Better solution would be to examine
-        # the ICC profile.
-        if image['comp'] == '?' and image['enc'] in ('ccitt', 'jbig2'):
-            image['comp'] = FRIENDLY_COMP['gray']
-
-        image['dpi_w'] = image['dpi_h'] = 0
-
-        for xobj in contentsinfo.xobject_settings:
-            # Loop in case the same image is display multiple times on a page
-            if xobj.name != image['name']:
-                continue
-
-            if xobj.stack_depth == 0 and _is_unit_square(xobj.shorthand):
-                # At least one PDF in the wild (and test suite) draws an image
-                # when the graphics stack depth is 0, meaning that the image
-                # gets drawn into a square of 1x1 PDF units (or 1/72",
-                # or 0.35 mm).  The equivalent DPI will be >100,000.  Exclude
-                # these from our DPI calculation for the page.
-                continue
-
-            dpi_w, dpi_h = _get_dpi(
-                xobj.shorthand, (image['width'], image['height']))
-
-            # When image is used multiple times take the highest DPI it is
-            # rendered at
-            image['dpi_w'] = max(dpi_w, image.get('dpi_w', 0))
-            image['dpi_h'] = max(dpi_h, image.get('dpi_h', 0))
-
-        DPI_PREC = Decimal('1.000')
-        dpi = Decimal(image['dpi_w'] * image['dpi_h']).sqrt()
-        image['dpi_w'] = Decimal(image['dpi_w']).quantize(DPI_PREC)
-        image['dpi_h'] = Decimal(image['dpi_h']).quantize(DPI_PREC)
-        image['dpi'] = dpi.quantize(DPI_PREC)
-        yield image
-
-
-def _find_form_xobject_images(pdf, container, contentsinfo):
-    """Find any images that are in Form XObjects in the container
-
-    The container may be a page, or a parent Form XObject.
-
-    """
-    if '/Resources' not in container:
-        return
-    resources = container['/Resources']
-    if '/XObject' not in resources:
-        return
-    for xobj in resources['/XObject']:
-        candidate = resources['/XObject'][xobj]
-        if candidate['/Subtype'] != '/Form':
-            continue
-
-        form_xobject = candidate
-        for settings in contentsinfo.xobject_settings:
-            if settings.name != xobj:
-                continue
-
-            # Find images once for each time this Form XObject is drawn.
-            # This could be optimized to cache the multiple drawing events
-            # but in practice both Form XObjects and multiple drawing of the
-            # same object are both very rare.
-            ctm_shorthand = settings.shorthand
-            yield from _find_images(pdf, form_xobject, ctm_shorthand)
-
-
-def _find_images(pdf, container, shorthand=None):
-    """Find all individual instances of images drawn in the container
-
-    Usually the container is a page, but it may also be a Form XObject.
-
-    On a typical page images are stored inline or as regular images
-    in an XObject.
-
-    Form XObjects may include inline images, XObject images,
-    and recursively, other Form XObjects; and also vector drawing commands.
-
-    Every instance of an image being drawn somewhere is flattened and
-    treated as a unique image, since if the same image is drawn multiple times
-    on one page it may be drawn at differing resolutions, and our objective
-    is to find the resolution at which the page can be rastered without
-    downsampling.
-
-    """
-
-    if container.get('/Type') == '/Page' and '/Contents' in container:
-        # For a /Page the content stream is attached to the page's /Contents
-        page = container
-        contentstream = pypdf.pdf.ContentStream(page.getContents(), pdf)
-        initial_shorthand = shorthand or UNIT_SQUARE
-    elif container.get('/Type') == '/XObject' and \
-            container['/Subtype'] == '/Form':
-        # For a Form XObject that content stream is attached to the XObject
-        contentstream = pypdf.pdf.ContentStream(container, pdf)
-
-        # Set the CTM to the state it was when the "Do" operator was
-        # encountered that is drawing this instance of the Form XObject
-        ctm = _matrix_from_shorthand(shorthand or UNIT_SQUARE)
-
-        # A Form XObject may provide its own matrix to map form space into
-        # user space. Get this if one exists
-        form_matrix = _matrix_from_shorthand(
-                container.get('/Matrix', UNIT_SQUARE))
-
-        # Concatenate form matrix with CTM to ensure CTM is correct for
-        # drawing this instance of the XObject
-        ctm = matrix_mult(form_matrix, ctm)
-        initial_shorthand = _shorthand_from_matrix(ctm)
-    else:
-        return
-
-    contentsinfo = _interpret_contents(contentstream, initial_shorthand)
-
-    yield from _find_inline_images(contentsinfo)
-    yield from _find_regular_images(container, contentsinfo)
-    yield from _find_form_xobject_images(pdf, container, contentsinfo)
-
-
-def _page_has_text(pdf, page):
-    if not '/Contents' in page:
-        return False
-
-    # Simple test
-    text = page.extractText()
-    if text.strip() != '':
-        return True
-
-    # More nuanced test to deal with quirks of Tesseract PDF generation
-    # Check if there's a Glyphless font
-    try:
-        font = page['/Resources']['/Font']
-    except KeyError:
-        pass
-    else:
-        font_objects = list(font.keys())
-        for font_object in font_objects:
-            basefont = font[font_object]['/BaseFont']
-            if basefont.endswith('GlyphLessFont'):
-                return True
-
-    return False
-
-
-def _pdf_get_pageinfo(infile, pageno: int):
-    pageinfo = {}
-    pageinfo['pageno'] = pageno
-    pageinfo['images'] = []
-
-    pdf = pypdf.PdfFileReader(infile)
-    page = pdf.pages[pageno]
-
-    pageinfo['has_text'] = _page_has_text(pdf, page)
-
-    width_pt = page.mediaBox.getWidth()
-    height_pt = page.mediaBox.getHeight()
-    pageinfo['width_inches'] = width_pt / Decimal(72.0)
-    pageinfo['height_inches'] = height_pt / Decimal(72.0)
-
-    try:
-        pageinfo['rotate'] = int(page['/Rotate'])
-    except KeyError:
-        pageinfo['rotate'] = 0
-
-    pageinfo['images'] = [im for im in
-                          _find_images(pdf, page)]
-    if pageinfo['images']:
-        xres = max(image['dpi_w'] for image in pageinfo['images'])
-        yres = max(image['dpi_h'] for image in pageinfo['images'])
-        pageinfo['xres'], pageinfo['yres'] = xres, yres
-        pageinfo['width_pixels'] = \
-            int(round(xres * pageinfo['width_inches']))
-        pageinfo['height_pixels'] = \
-            int(round(yres * pageinfo['height_inches']))
-
-    return pageinfo
-
-
-def pdf_get_all_pageinfo(infile):
-    pdf = pypdf.PdfFileReader(infile)
-    return [_pdf_get_pageinfo(infile, n) for n in range(pdf.numPages)]
-
-
-def main():
-    import argparse
-    parser = argparse.ArgumentParser()
-    parser.add_argument('infile')
-    args = parser.parse_args()
-    info = pdf_get_all_pageinfo(args.infile)
-    from pprint import pprint
-    pprint(info)
-
-
-if __name__ == '__main__':
-    main()

requirements.txt

@@ -2,8 +2,9 @@
 # setup.py lists a separate set of requirements that are looser to simplify
 # installation
 ruffus == 2.6.3
-Pillow == 5.0.0
+Pillow == 5.1.0
 reportlab == 3.4.0
 PyPDF2 == 1.26.0
 img2pdf == 0.2.4
-cffi == 1.11.2
+cffi == 1.11.5
+PyMuPDF == 1.12.5

setup.cfg

@@ -11,4 +11,6 @@ ignore =
 [tool:pytest]
 norecursedirs = lib .pc .git output cache resources
 testpaths = tests
-addopts = -n auto
+
+[metadata]
+license_file = LICENSE

setup.py

@@ -1,6 +1,21 @@
 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 # © 2015 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from __future__ import print_function, unicode_literals
 
@@ -171,13 +186,10 @@ if not forced and command.startswith('install') or \
     )
     check_external_program(
         program='qpdf',
-        need_version='5.1.1',   # limited by Travis CI / Ubuntu 14.04 backports
+        need_version='7.0.0', # test suite known to fail on 5.1.1
         package='qpdf',
         version_check_args=['--version']
     )
-else:
-    print('Skipping external program tests because of --force')
-
 
 if 'upload' in sys.argv[1:]:
     print('Use twine to upload the package - setup.py upload is insecure')
@@ -197,8 +209,8 @@ setup(
     url='https://github.com/jbarlow83/OCRmyPDF',
     author='James R. Barlow',
     author_email='jim@purplerock.ca',
-    license='MIT',
-    packages=find_packages(exclude=["tests", "tests.*"]),
+    packages=find_packages('src', exclude=["tests", "tests.*"]),
+    package_dir={'': 'src'},
     keywords=['PDF', 'OCR', 'optical character recognition', 'PDF/A', 'scanning'],
     classifiers=[
         "Programming Language :: Python :: 3.5",
@@ -208,7 +220,7 @@ setup(
         "Intended Audience :: End Users/Desktop",
         "Intended Audience :: Science/Research",
         "Intended Audience :: System Administrators",
-        "License :: OSI Approved :: MIT License",
+        "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
         "Operating System :: MacOS :: MacOS X",
         "Operating System :: POSIX",
         "Operating System :: POSIX :: BSD",
@@ -217,24 +229,30 @@ setup(
         "Topic :: Text Processing :: Indexing",
         "Topic :: Text Processing :: Linguistic",
         ],
-    python_requires='>=3.5',
+    python_requires=' >= 3.5',
     setup_requires=[
+        'cffi >= 1.9.1',        # to build the leptonica module
+        'pytest-runner',        # to enable python setup.py test
         'setuptools_scm',       # so that version will work
-        'cffi>=1.9.1',          # to build the leptonica module
-        'pytest-runner'         # to enable python setup.py test
     ],
     use_scm_version={'version_scheme': 'post-release'},
     cffi_modules=[
-        'ocrmypdf/lib/compile_leptonica.py:ffibuilder'
+        'src/ocrmypdf/lib/compile_leptonica.py:ffibuilder'
     ],
     install_requires=[
-        'ruffus==2.6.3',        # pinned - ocrmypdf implements a 2.6.3 workaround
-        'Pillow>=4.0.0',        # Pillow < 4 has BytesIO/TIFF bug w/img2pdf 0.2.3
-        'reportlab>=3.3.0',     # oldest released version with sane image handling
-        'PyPDF2>=1.26',         # pure Python, so track HEAD closely
-        'img2pdf>=0.2.3',       # pure Python, so track HEAD closely
-        'cffi>=1.9.1'           # must be a setup and install requirement
+        'cffi >= 1.9.1',          # must be a setup and install requirement
+        'defusedxml >= 0.5.0',    # pure Python, so track HEAD closely
+        'img2pdf >= 0.2.4',       # pure Python, so track HEAD closely
+        'Pillow >= 4.0.0, != 5.1.0 ; sys_platform == "darwin"',        
+                                  # Pillow < 4 has BytesIO/TIFF bug w/img2pdf 0.2.3
+                                  # block 5.1.0, broken wheels
+        'PyPDF2 >= 1.26',         # pure Python, so track HEAD closely
+        'reportlab >= 3.3.0',     # oldest released version with sane image handling
+        'ruffus == 2.6.3',        # pinned - ocrmypdf implements a 2.6.3 workaround
     ],
+    extras_require={
+        'fitz': ['PyMuPDF >= 1.12.5']     # for table of contents bug
+    },
     tests_require=tests_require,
     entry_points={
         'console_scripts': [

src/ocrmypdf/__init__.py

@@ -0,0 +1,25 @@
+# © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+
+import pkg_resources
+
+PROGRAM_NAME = 'ocrmypdf'
+
+# Official PEP 396
+__version__ = pkg_resources.get_distribution('ocrmypdf').version
+
+VERSION = __version__

src/ocrmypdf/__main__.py

@@ -1,8 +1,24 @@
 #!/usr/bin/env python3
 # © 2015-17 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from tempfile import mkdtemp
 from collections.abc import Sequence
+from pathlib import Path
 import sys
 import os
 import re
@@ -23,11 +39,14 @@ import ruffus.proxy_logger as proxy_logger
 from .pipeline import JobContext, JobContextManager, \
     cleanup_working_files, build_pipeline
 from .pdfa import file_claims_pdfa
-from .helpers import is_iterable_notstr, re_symlink, is_file_writable
+from .helpers import is_iterable_notstr, re_symlink, is_file_writable, \
+    available_cpu_count
 from .exec import tesseract, qpdf, ghostscript
+from .lib import fitz
 from . import PROGRAM_NAME, VERSION
 
-from .exceptions import *
+from .exceptions import ExitCode, ExitCodeException, MissingDependencyError, \
+    InputFileError, BadArgsError, OutputFileAccessError
 from . import exceptions as ocrmypdf_exceptions
 from ._unicodefun import verify_python3_env
 
@@ -265,7 +284,7 @@ advanced.add_argument(
     )
 advanced.add_argument(
     '--pdf-renderer',
-    choices=['auto', 'tesseract', 'hocr', 'tess4', 'sandwich'], default='auto',
+    choices=['auto', 'tesseract', 'hocr', 'sandwich'], default='auto',
     help="Choose OCR PDF renderer - the default option is to let OCRmyPDF "
          "choose."
          "auto - let OCRmyPDF choose; "
@@ -274,7 +293,6 @@ advanced.add_argument(
          "tesseract - gives better results for non-Latin languages and "
          "Tesseract older than 3.05.01 but has problems with some versions "
          " of Ghostscript; deprecated"
-         "tess4 - deprecated alias for 'sandwich'"
     )
 advanced.add_argument(
     '--tesseract-timeout', default=180.0, type=float, metavar='SECONDS',
@@ -304,6 +322,14 @@ advanced.add_argument(
 advanced.add_argument(
     '--user-patterns', metavar='FILE',
     help="Specify the location of the Tesseract user patterns file.")
+advanced.add_argument(
+    '--skip-repair', action='store_true',
+    help="Normally OCRmyPDF automatically repairs PDFs using qpdf before "
+         "processing.  If you have already run qpdf or a similar program "
+         "that repairs PDF errors, you can tell OCRmyPDF to skip repair with "
+         "this option.  This may be helpful in batch processing where all "
+         "files are repaired prior to OCR occurs, since repair is single "
+         "threaded and time consuming for large files.")
 
 debugging = parser.add_argument_group(
     "Debugging",
@@ -349,11 +375,6 @@ def check_options_output(options, log):
             "The 'sandwich' renderer requires Tesseract 3.05.01 or newer; "
             "or Tesseract 4.00 alpha newer than February 2017.")
 
-    if options.pdf_renderer == 'tess4':
-        log.warning("The 'tess4' PDF renderer has been renamed to 'sandwich'. "
-                    "Please use --pdf-renderer=sandwich.")
-        options.pdf_renderer = 'sandwich'
-
     if options.pdf_renderer == 'tesseract':
         if tesseract.version() < '3.05' and \
                 options.output_type.startswith('pdfa'):
@@ -447,15 +468,12 @@ def check_options_ocr_behavior(options, log):
 
 
 def check_options_advanced(options, log):
-    if tesseract.v4():
-        log.info(
-            "Tesseract v4.x.alpha found.")
     if options.tesseract_oem and not tesseract.v4():
         log.warning(
             "--tesseract-oem requires Tesseract 4.x -- argument ignored")
-    if options.pdf_renderer == 'tess4' and not tesseract.has_textonly_pdf():
+    if options.pdf_renderer == 'sandwich' and not tesseract.has_textonly_pdf():
         raise MissingDependencyError(
-            "--pdf-renderer tess4 requires Tesseract 4.x "
+            "--pdf-renderer sandwich requires Tesseract 4.x "
             "commit 3d9fb3b or later")
     if options.pdfa_image_compression != 'auto' and \
             options.output_type.startswith('pdfa'):
@@ -479,6 +497,12 @@ def check_options_metadata(options, log):
                 ))
 
 
+def check_options_pillow(options, log):
+    PIL.Image.MAX_IMAGE_PIXELS = int(options.max_image_mpixels * 1000000)
+    if PIL.Image.MAX_IMAGE_PIXELS == 0:
+        PIL.Image.MAX_IMAGE_PIXELS = None
+
+
 def check_options(options, log):
     try:
         check_options_languages(options, log)
@@ -488,6 +512,7 @@ def check_options(options, log):
         check_options_preprocessing(options, log)
         check_options_ocr_behavior(options, log)
         check_options_advanced(options, log)
+        check_options_pillow(options, log)
     except ValueError as e:
         log.error(e)
         sys.exit(ExitCode.bad_args)
@@ -523,24 +548,6 @@ def logging_factory(logger_name, logger_args):
     return root_logger
 
 
-def available_cpu_count():
-    try:
-        return multiprocessing.cpu_count()
-    except NotImplementedError:
-        pass
-
-    try:
-        import psutil
-        return psutil.cpu_count()
-    except (ImportError, AttributeError):
-        pass
-
-    complain(
-        "Could not get CPU count.  Assuming one (1) CPU."
-        "Use -j N to set manually.")
-    return 1
-
-
 def cleanup_ruffus_error_message(msg):
     msg = re.sub(r'\s+', r' ', msg)
     msg = re.sub(r"\((.+?)\)", r'\1', msg)
@@ -554,6 +561,7 @@ def do_ruffus_exception(ruffus_five_tuple, options, log):
     exit_code = None
 
     task_name, job_name, exc_name, exc_value, exc_stack = ruffus_five_tuple
+    job_name = job_name  # unused
     if exc_name == 'builtins.SystemExit':
         match = re.search(r"\.(.+?)\)", exc_value)
         exit_code_name = match.groups()[0]
@@ -576,6 +584,21 @@ def do_ruffus_exception(ruffus_five_tuple, options, log):
         msg = "Error occurred while running this command:"
         log.error(msg + '\n' + exc_value)
         exit_code = ExitCode.child_process_error
+    elif (exc_name == 'PyPDF2.utils.PdfReadError' and \
+            'not been decrypted' in exc_value) or \
+            (exc_name == 'ocrmypdf.exceptions.EncryptedPdfError'):
+        log.error(textwrap.dedent("""\
+            Input PDF is encrypted. The encryption must be removed to
+            perform OCR. 
+
+            For information about this PDF's security use
+                qpdf --show-encryption infilename
+
+            You can remove the encryption using
+                qpdf --decrypt [--password=[password]] infilename
+
+            """))
+        exit_code = ExitCode.encrypted_pdf        
     elif exc_name == 'ocrmypdf.exceptions.PdfMergeFailedError':
         log.error(textwrap.dedent("""\
             Failed to merge PDF image layer with OCR layer
@@ -591,19 +614,6 @@ def do_ruffus_exception(ruffus_five_tuple, options, log):
         base_exc_name = exc_name.replace('ocrmypdf.exceptions.', '')
         exc_class = getattr(ocrmypdf_exceptions, base_exc_name)
         exit_code = exc_class.exit_code
-    elif exc_name == 'PyPDF2.utils.PdfReadError' and \
-            'not been decrypted' in exc_value:
-        log.error(textwrap.dedent("""\
-            Input PDF uses either an encryption algorithm or a PDF security
-            handler that is not supported by ocrmypdf.
-
-            For information about this PDF's security use
-                qpdf --show-encryption [...input PDF...]
-
-            (Only algorithms "R = 1" and "R = 2" are supported.)
-
-            """))
-        exit_code = ExitCode.encrypted_pdf
     elif exc_name == 'PIL.Image.DecompressionBombError':
         msg = cleanup_ruffus_error_message(exc_value)
         msg += ("\nUse the --max-image-mpixels argument to set increase the "
@@ -622,6 +632,21 @@ def do_ruffus_exception(ruffus_five_tuple, options, log):
 def traverse_ruffus_exception(e_args, options, log):
     """Walk through a RethrownJobError and find the first exception.
 
+    Ruffus flattens exception to 5 element tuples. Because of a bug
+    in <= 2.6.3 it may present either the single:
+      (task, job, exc, value, stack)
+    or something like:
+      [[(task, job, exc, value, stack)]]
+    
+    Generally cross-process exception marshalling doesn't work well
+    and ruffus doesn't support because BaseException has its own
+    implementation of __reduce__ that attempts to reconstruct the
+    exception based on e.__init__(e.args).
+    
+    Attempting to log the exception directly marshalls it to the logger
+    which is probably in another process, so it's better to log only
+    data from the exception at this point.
+
     The exit code will be based on this, even if multiple exceptions occurred
     at the same time."""
 
@@ -653,6 +678,9 @@ def check_closed_streams(options):
 
     """
 
+    if sys.version_info[0:3] >= (3, 6, 4):
+        return True  # Issued fixed in Python 3.6.4+
+
     if sys.stderr is None:
         sys.stderr = open(os.devnull, 'w')
 
@@ -683,7 +711,7 @@ def log_page_orientations(pdfinfo, _log):
                 180: 's', 270: 'w'}
     orientations = []
     for n, page in enumerate(pdfinfo):
-        angle = pdfinfo[n].rotation or 0
+        angle = page.rotation or 0
         if angle != 0:
             orientations.append('{0}{1}'.format(
                 n + 1,
@@ -692,6 +720,89 @@ def log_page_orientations(pdfinfo, _log):
         _log.info('Page orientations detected: ' + ' '.join(orientations))
 
 
+def preamble(_log):
+    _log.debug('ocrmypdf ' + VERSION)
+    _log.debug('tesseract ' + tesseract.version())
+    _log.debug('qpdf ' + qpdf.version())
+    if fitz:
+        _log.debug('PyMuPDF ' + fitz.version[0])
+        _log.debug('libmupdf ' + fitz.version[1])
+    else:
+        _log.debug('PyMuPDF not installed')
+
+
+def check_environ(options, _log):
+    old_envvars = (
+        'OCRMYPDF_TESSERACT',
+        'OCRMYPDF_QPDF',
+        'OCRMYPDF_GS',
+        'OCRMYPDF_UNPAPER')
+    for k in old_envvars:
+        if k in os.environ:
+            _log.warning(textwrap.dedent("""\
+                OCRmyPDF no longer uses the environment variable {}. 
+                Change PATH to select alternate programs.""".format(k)))
+
+
+def check_input_file(options, _log, start_input_file):
+    if options.input_file == '-':
+        # stdin
+        _log.info('reading file from standard input')
+        with open(start_input_file, 'wb') as stream_buffer:
+            from shutil import copyfileobj
+            copyfileobj(sys.stdin.buffer, stream_buffer)
+    else:
+        try:
+            re_symlink(options.input_file, start_input_file, _log)
+        except FileNotFoundError:
+            _log.error("File not found - " + options.input_file)
+            raise InputFileError()
+
+
+def check_requested_output_file(options, _log):
+    if options.output_file == '-':
+        if sys.stdout.isatty():
+            _log.error(textwrap.dedent("""\
+                Output was set to stdout '-' but it looks like stdout
+                is connected to a terminal.  Please redirect stdout to a
+                file."""))
+            raise BadArgsError()
+    elif not is_file_writable(options.output_file):
+        _log.error(
+            "Output file location (" + options.output_file + ") " +
+            "is not a writable file.")
+        raise OutputFileAccessError()
+
+
+def report_output_file_size(options, _log, input_file, output_file):
+    try:
+        output_size = Path(output_file).stat().st_size
+        input_size = Path(input_file).stat().st_size
+    except FileNotFoundError:
+        return  # Outputting to stream or something
+    ratio = output_size / input_size
+    if ratio < 1.35 or input_size < 25000:
+        return  # Seems fine
+    
+    reasons = []
+    if not fitz:
+        reasons.append("The optional dependency PyMuPDF is not installed.")
+    if options.force_ocr:
+        reasons.append("The argument --force-ocr was issued.")
+
+    if reasons:
+        explanation = (
+            "Possible reasons for this include:\n" + '\n'.join(reasons) + "\n")
+    else:
+        explanation = (
+            "No reason for this increase is known.  Please report this issue.")
+
+    _log.warning(textwrap.dedent("""\
+        The output file size is {:.2f}× larger than the input file.
+        {}
+        """.format(ratio, explanation)))
+
+
 def run_pipeline():
     options = parser.parse_args()
     options.verbose_abbreviated_path = 1
@@ -703,16 +814,9 @@ def run_pipeline():
 
     _log, _log_mutex = proxy_logger.make_shared_logger_and_proxy(
         logging_factory, __name__, logger_args)
-    _log.debug('ocrmypdf ' + VERSION)
-    _log.debug('tesseract ' + tesseract.version())
-    _log.debug('qpdf ' + qpdf.version())
-
+    preamble(_log)
     check_options(options, _log)
 
-    PIL.Image.MAX_IMAGE_PIXELS = int(options.max_image_mpixels * 1000000)
-    if PIL.Image.MAX_IMAGE_PIXELS == 0:
-        PIL.Image.MAX_IMAGE_PIXELS = None
-
     # Complain about qpdf version < 7.0.0
     # Suppress the warning if in the test suite, since there are no PPAs
     # for qpdf 7.0.0 for Ubuntu trusty (i.e. Travis)
@@ -727,6 +831,16 @@ def run_pipeline():
     # options.input_file, options.pdf_renderer are already bound.)
     if not options.jobs:
         options.jobs = available_cpu_count()
+
+    # Performance is improved by setting Tesseract to single threaded. In tests
+    # this gives better throughput than letting a smaller number of Tesseract
+    # jobs run multithreaded.
+    if tesseract.v4():
+        os.environ.setdefault('OMP_THREAD_LIMIT', '1')
+    check_environ(options, _log)
+    if os.environ.get('PYTEST_CURRENT_TEST'):
+        os.environ['_OCRMYPDF_TEST_INFILE'] = options.input_file
+
     try:
         work_folder = mkdtemp(prefix="com.github.ocrmypdf.")
         options.history_file = os.path.join(
@@ -734,37 +848,14 @@ def run_pipeline():
         start_input_file = os.path.join(
             work_folder, 'origin')
 
-        if options.input_file == '-':
-            # stdin
-            _log.info('reading file from standard input')
-            with open(start_input_file, 'wb') as stream_buffer:
-                from shutil import copyfileobj
-                copyfileobj(sys.stdin.buffer, stream_buffer)
-        else:
-            try:
-                re_symlink(options.input_file, start_input_file, _log)
-            except FileNotFoundError:
-                _log.error("File not found - " + options.input_file)
-                return ExitCode.input_file
-
-        if options.output_file == '-':
-            if sys.stdout.isatty():
-                _log.error(textwrap.dedent("""\
-                    Output was set to stdout '-' but it looks like stdout
-                    is connected to a terminal.  Please redirect stdout to a
-                    file."""))
-                return ExitCode.bad_args
-        elif not is_file_writable(options.output_file):
-            _log.error(
-                "Output file location (" + options.output_file + ") " +
-                "is not writable.")
-            return ExitCode.file_access_error
+        check_input_file(options, _log, start_input_file)
+        check_requested_output_file(options, _log)
 
         manager = JobContextManager()
-        manager.register('JobContext', JobContext)
+        manager.register('JobContext', JobContext)  # pylint: disable=no-member
         manager.start()
 
-        context = manager.JobContext()
+        context = manager.JobContext()  # pylint: disable=no-member
         context.set_options(options)
         context.set_work_folder(work_folder)
 
@@ -774,22 +865,6 @@ def run_pipeline():
     except ruffus_exceptions.RethrownJobError as e:
         if options.verbose:
             _log.debug(str(e))  # stringify exception so logger doesn't have to
-
-        # Ruffus flattens exception to 5 element tuples. Because of a bug
-        # in <= 2.6.3 it may present either the single:
-        #   (task, job, exc, value, stack)
-        # or something like:
-        #   [[(task, job, exc, value, stack)]]
-        #
-        # Generally cross-process exception marshalling doesn't work well
-        # and ruffus doesn't support because BaseException has its own
-        # implementation of __reduce__ that attempts to reconstruct the
-        # exception based on e.__init__(e.args).
-        #
-        # Attempting to log the exception directly marshalls it to the logger
-        # which is probably in another process, so it's better to log only
-        # data from the exception at this point.
-
         exitcode = traverse_ruffus_exception(e.args, options, _log)
         if exitcode is None:
             _log.error("Unexpected ruffus exception: " + str(e))
@@ -804,7 +879,12 @@ def run_pipeline():
 
     if options.flowchart:
         _log.info("Flowchart saved to {}".format(options.flowchart))
-    elif options.output_file != '-':
+        return ExitCode.ok
+    elif options.output_file == '-':
+        _log.info("Output sent to stdout")
+    elif os.path.samefile(options.output_file, os.devnull):
+        pass  # Say nothing when sending to dev null
+    else:
         if options.output_type.startswith('pdfa'):
             pdfa_info = file_claims_pdfa(options.output_file)
             if pdfa_info['pass']:
@@ -817,8 +897,9 @@ def run_pipeline():
         if not qpdf.check(options.output_file, _log):
             _log.warning('Output file: The generated PDF is INVALID')
             return ExitCode.invalid_output_pdf
-    else:
-        _log.info("Output sent to stdout")
+
+        report_output_file_size(options, _log, start_input_file, 
+                                options.output_file)
 
     pdfinfo = context.get_pdfinfo()
     if options.verbose:

src/ocrmypdf/_unicodefun.py

@@ -97,7 +97,7 @@ def verify_python3_env():
                 break
         if bad_locale is not None:
             extra += (
-                '\n\ocrmypdf discovered that you exported a UTF-8 locale\n'
+                '\nocrmypdf discovered that you exported a UTF-8 locale\n'
                 'but the locale system could not pick up from it because\n'
                 'it does not exist.  The exported locale is "%s" but it\n'
                 'is not supported'

src/ocrmypdf/exceptions.py

@@ -1,5 +1,19 @@
-#!/usr/bin/env python3
 # © 2016 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 
 from enum import IntEnum
@@ -23,6 +37,10 @@ class ExitCodeException(Exception):
     exit_code = ExitCode.other_error
 
 
+class BadArgsError(ExitCodeException):
+    exit_code = ExitCode.bad_args
+
+
 class PdfMergeFailedError(ExitCodeException):
     exit_code = ExitCode.input_file
 
@@ -39,6 +57,10 @@ class DpiError(ExitCodeException):
     exit_code = ExitCode.input_file
 
 
+class OutputFileAccessError(ExitCodeException):
+    exit_code = ExitCode.file_access_error
+
+
 class PriorOcrFoundError(ExitCodeException):
     exit_code = ExitCode.already_done_ocr
 

src/ocrmypdf/exec/__init__.py

@@ -0,0 +1,56 @@
+# © 2016 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+
+"""Wrappers to manage subprocess calls"""
+
+import os
+import re
+import sys
+from subprocess import run, STDOUT, PIPE, CalledProcessError
+from ..exceptions import MissingDependencyError
+
+
+
+def get_version(program, *, 
+        version_arg='--version', regex=r'(\d+(\.\d+)*)'):
+    "Get the version of the specified program"
+    args_prog = [
+        program,
+        version_arg
+    ]
+    try:
+        proc = run(
+            args_prog, close_fds=True, universal_newlines=True,
+            stdout=PIPE, stderr=STDOUT, check=True)
+        output = proc.stdout
+    except CalledProcessError as e:
+        if e.returncode < 0:
+            raise MissingDependencyError(
+                "Ran program '{}' but it exited with an error:\n{}".format(
+                    program, e.output)) from e
+        raise MissingDependencyError(
+            "Could not find program '{}' on the PATH".format(
+                program)) from e
+    try:
+        version = re.match(regex, output.strip()).group(1)
+    except AttributeError as e:
+        raise MissingDependencyError(
+            ("The program '{}' did not report its version. "
+            "Message was:\n{}").format(program, output)
+        )
+
+    return version

src/ocrmypdf/exec/ghostscript.py

@@ -1,5 +1,19 @@
-#!/usr/bin/env python3
 # © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from tempfile import NamedTemporaryFile
 from subprocess import run, PIPE, STDOUT, CalledProcessError
@@ -8,7 +22,7 @@ from functools import lru_cache
 import re
 import sys
 from PIL import Image
-from . import get_program, get_version
+from . import get_version
 from ..exceptions import SubprocessOutputError, MissingDependencyError
 from ..helpers import fspath
 
@@ -18,6 +32,18 @@ def version():
     return get_version('gs')
 
 
+def jpeg_passthrough_available():
+    """
+    Ghostscript 9.23 introduced JPEG passthrough but it seems to corrupt the
+    last two bytes of certain images, for now we disable it for 9.23 and
+    do not mention it for < 9.23.
+
+    https://bugs.ghostscript.com/show_bug.cgi?id=699216
+
+    """
+    return False
+
+
 def _gs_error_reported(stream):
     return re.search(r'error', stream, flags=re.IGNORECASE)
 
@@ -47,7 +73,7 @@ def rasterize_pdf(input_file, output_file, xres, yres, raster_device, log,
         page_dpi = res
     with NamedTemporaryFile(delete=True) as tmp:
         args_gs = [
-            get_program('gs'),
+            'gs',
             '-dQUIET',
             '-dSAFER',
             '-dBATCH',
@@ -113,9 +139,20 @@ def generate_pdfa(pdf_pages, output_file, compression, log,
             "-dAutoFilterGrayImages=true",
         ]
 
+    # Older versions of Ghostscript expect a leading slash in 
+    # sColorConversionStrategy, newer ones should not have it. See Ghostscript 
+    # git commit fe1c025d.
+    strategy = 'RGB' if version() >= '9.19' else '/RGB'
+
+    if version() == '9.23':
+        # 9.23: new feature JPEG passthrough is broken in some cases, best to
+        # disable it always
+        # https://bugs.ghostscript.com/show_bug.cgi?id=699216
+        compression_args.append('-dPassThroughJPEGImages=false')
+
     with NamedTemporaryFile(delete=True) as gs_pdf:
         args_gs = [
-            get_program("gs"),
+            "gs",
             "-dQUIET",
             "-dBATCH",
             "-dNOPAUSE",
@@ -123,7 +160,7 @@ def generate_pdfa(pdf_pages, output_file, compression, log,
             "-dNumRenderingThreads=" + str(threads),
             "-sDEVICE=pdfwrite",
             "-dAutoRotatePages=/None",
-            "-sColorConversionStrategy=/RGB",
+            "-sColorConversionStrategy=" + strategy,
             "-sProcessColorModel=DeviceRGB"
         ] + compression_args + [
             "-dJPEGQ=95",

src/ocrmypdf/exec/qpdf.py

@@ -1,5 +1,19 @@
-#!/usr/bin/env python3
 # © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from subprocess import CalledProcessError, STDOUT, PIPE, run
 from functools import lru_cache
@@ -10,7 +24,7 @@ import resource
 
 from ..exceptions import InputFileError, SubprocessOutputError, \
     MissingDependencyError, EncryptedPdfError
-from . import get_program, get_version
+from . import  get_version
 from ..helpers import re_symlink
 
 
@@ -21,7 +35,7 @@ def version():
 
 def check(input_file, log=None):
     args_qpdf = [
-        get_program('qpdf'),
+        'qpdf',
         '--check',
         input_file
     ]
@@ -57,7 +71,7 @@ def _probably_encrypted(e):
 
 def repair(input_file, output_file, log):
     args_qpdf = [
-        get_program('qpdf'), input_file, output_file
+        'qpdf', input_file, output_file
     ]
     try:
         run(args_qpdf, stderr=STDOUT, stdout=PIPE, universal_newlines=True, 
@@ -68,8 +82,6 @@ def repair(input_file, output_file, log):
             return
 
         if _probably_encrypted(e):
-            log.error("{0}: this PDF is password-protected - password must "
-                      "be removed for OCR".format(input_file))
             raise EncryptedPdfError() from e
         elif e.returncode == 2:
             log.error("{0}: not a valid PDF, and could not repair it.".format(
@@ -86,7 +98,7 @@ def repair(input_file, output_file, log):
 def get_npages(input_file, log):
     try:
         pages = run(
-            [get_program('qpdf'), '--show-npages', input_file],
+            ['qpdf', '--show-npages', input_file],
             universal_newlines=True, check=True, stdout=PIPE, stderr=STDOUT)
     except CalledProcessError as e:
         if e.returncode == 2 and e.output.find('No such file'):
@@ -103,13 +115,22 @@ def split_pages(input_file, work_folder, npages):
     """
     for n in range(int(npages)):
         args_qpdf = [
-            get_program('qpdf'), input_file,
+            'qpdf', input_file,
             '--pages', input_file, '{0}'.format(n + 1), '--',
             os.path.join(work_folder, '{0:06d}.page.pdf'.format(n + 1))
         ]
         run(args_qpdf, check=True)
 
 
+def extract_page(input_file, output_file, pageno):
+    args_qpdf = [
+        'qpdf', input_file,
+        '--pages', input_file, '{0}'.format(pageno + 1), '--',
+        output_file
+    ]
+    run(args_qpdf, check=True)
+    
+
 def _merge_inner(input_files, output_file, min_version=None, log=None):
     """Merge the list of input files (all filenames) into the output file.
 
@@ -126,7 +147,7 @@ def _merge_inner(input_files, output_file, min_version=None, log=None):
         import logging as log
 
     args_qpdf = [
-        get_program('qpdf')
+        'qpdf'
     ] + version_arg + [
         input_files[0], '--pages'
     ] + input_files + ['--', output_file]
@@ -181,7 +202,7 @@ def merge(input_files, output_file, min_version=None, log=None, max_files=None):
         n = min(step_size, len(workqueue))
         job = workqueue[0:n]
         del workqueue[0:n]
-        print('merging ' + repr(job))
+        log.debug('merging ' + repr(job))
 
         # Merge them into 1 file, which will contain n^depth pages
         merge_file = os.path.join(
@@ -191,7 +212,7 @@ def merge(input_files, output_file, min_version=None, log=None, max_files=None):
 
         # On the next 
         next_workqueue.append(merge_file)
-        print('next_workqueue ' + repr(next_workqueue))
+        log.debug('next_workqueue ' + repr(next_workqueue))
 
         # If we're out of things to do in this queue, move on to the next
         # queue. On the counter-th pass of the workqueue we can chew through
@@ -201,6 +222,6 @@ def merge(input_files, output_file, min_version=None, log=None, max_files=None):
             workqueue = next_workqueue
             next_workqueue = []
 
-    re_symlink(workqueue.pop(), output_file)
+    re_symlink(workqueue.pop(), output_file, log)
 
 

src/ocrmypdf/exec/tesseract.py

@@ -1,5 +1,19 @@
-#!/usr/bin/env python3
 # © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 import sys
 import os
@@ -8,13 +22,15 @@ import shutil
 from functools import lru_cache
 from collections import namedtuple
 from textwrap import dedent
-import PyPDF2 as pypdf
 from subprocess import PIPE, CalledProcessError, \
     TimeoutExpired, check_output, STDOUT
+from contextlib import suppress
+
+import PyPDF2 as pypdf
 
 from ..exceptions import MissingDependencyError, TesseractConfigError
 from ..helpers import page_number
-from . import get_program, get_version
+from . import get_version
 
 OrientationConfidence = namedtuple(
     'OrientationConfidence',
@@ -56,7 +72,7 @@ def has_textonly_pdf():
     parse the parameter list
     """
     args_tess = [
-        get_program('tesseract'),
+        'tesseract',
         '--print-parameters'
     ]
     params = ''
@@ -80,7 +96,7 @@ def psm():
 @lru_cache(maxsize=1)
 def languages():
     args_tess = [
-        get_program('tesseract'),
+        'tesseract',
         '--list-langs'
     ]
     try:
@@ -99,7 +115,7 @@ def languages():
 
 def tess_base_args(langs, engine_mode):
     args = [
-        get_program('tesseract'),
+        'tesseract',
     ]
     if langs:
         args.extend(['-l', '+'.join(langs)])
@@ -158,7 +174,7 @@ def tesseract_log_output(log, stdout, input_file):
 
     try:
         text = stdout.decode()
-    except UnicodeDecodeError as e:
+    except UnicodeDecodeError:
         log.error(prefix + "command line output was not utf-8. " +
             "This usually means Tesseract's language packs do not match "
             "the installed version of Tesseract.")
@@ -267,6 +283,8 @@ def use_skip_page(text_only, skip_pdf, output_pdf, output_text):
         f.write('[skipped page]')
 
     if not text_only:
+        with suppress(FileNotFoundError):
+            os.remove(output_pdf)  # In case it was partially created
         os.symlink(skip_pdf, output_pdf)
         return
 

src/ocrmypdf/exec/unpaper.py

@@ -1,5 +1,20 @@
-#!/usr/bin/env python3
 # © 2015 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+
 # unpaper documentation:
 # https://github.com/Flameeyes/unpaper/blob/master/doc/basic-concepts.md
 
@@ -9,7 +24,7 @@ import sys
 import os
 from functools import lru_cache
 from ..exceptions import MissingDependencyError
-from . import get_program, get_version
+from . import get_version
 
 
 try:
@@ -26,7 +41,7 @@ def version():
 
 def run(input_file, output_file, dpi, log, mode_args):
     args_unpaper = [
-        get_program('unpaper'),
+        'unpaper',
         '-v',
         '--dpi', str(dpi)
     ] + mode_args
@@ -42,15 +57,15 @@ def run(input_file, output_file, dpi, log, mode_args):
             else:
                 im = im.convert(mode='RGB')
         except IOError as e:
-            log.error(
-                    "Could not convert image with type " + im.mode)
+            log.error("Could not convert image with type " + im.mode)
+            im.close()
             raise MissingDependencyError() from e
 
     try:
         suffix = SUFFIXES[im.mode]
     except KeyError:
-        log.error(
-                "Failed to convert image to a supported format.")
+        log.error("Failed to convert image to a supported format.")
+        im.close()
         raise MissingDependencyError() from e
 
     with NamedTemporaryFile(suffix=suffix) as input_pnm, \
@@ -75,20 +90,9 @@ def run(input_file, output_file, dpi, log, mode_args):
             Image.open(output_pnm.name).save(output_file, dpi=(dpi, dpi))
 
 
-def deskew(input_file, output_file, dpi, log):
-    run(input_file, output_file, dpi, log, [
-        '--mask-scan-size', '100',  # don't blank out narrow columns
-        '--no-border-align',  # don't align visible content to borders
-        '--no-mask-center',   # don't center visible content within page
-        '--no-grayfilter',    # don't remove light gray areas
-        '--no-blackfilter',   # don't remove solid black areas
-        '--no-noisefilter',   # don't remove salt and pepper noise
-        '--no-blurfilter'     # don't remove blurry objects/debris
-    ])
-
-
 def clean(input_file, output_file, dpi, log):
     run(input_file, output_file, dpi, log, [
+        '--layout', 'none',
         '--mask-scan-size', '100',  # don't blank out narrow columns
         '--no-border-align',  # don't align visible content to borders
         '--no-mask-center',   # don't center visible content within page

src/ocrmypdf/helpers.py

@@ -1,11 +1,27 @@
-#!/usr/bin/env python3
 # © 2016 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from functools import partial
 from collections.abc import Iterable
 from contextlib import suppress, contextmanager
+from pathlib import Path
 import sys
 import os
+import multiprocessing
 
 
 def re_symlink(input_file, soft_link_name, log=None):
@@ -53,9 +69,28 @@ def is_iterable_notstr(thing):
 
 
 def page_number(input_file):
+    "Get one-based page number implied by filename (000002.pdf -> 2)"
     return int(os.path.basename(input_file)[0:6])
 
 
+def available_cpu_count():
+    try:
+        return multiprocessing.cpu_count()
+    except NotImplementedError:
+        pass
+
+    try:
+        import psutil
+        return psutil.cpu_count()
+    except (ImportError, AttributeError):
+        pass
+
+    complain(
+        "Could not get CPU count.  Assuming one (1) CPU."
+        "Use -j N to set manually.")
+    return 1
+
+
 def is_file_writable(test_file):
     """Intentionally racy test if target is writable.
 
@@ -63,19 +98,32 @@ def is_file_writable(test_file):
     can replace it atomically. Before doing the OCR work, make sure
     the location is writable.
     """
-    if os.path.exists(test_file):
+    p = Path(test_file)
+
+    if p.is_symlink():
+        # Python 3.5 does not accept parameters for Path.resolve() and behaves
+        # as if strict=True (throws an exception on failure). Python 3.6 
+        # defaults to strict=False. This implements strict=False like behavior
+        # for Python 3.5.
+        if sys.version_info[0:2] <= (3, 5):
+            p = Path(os.path.realpath(str(p)))
+        else:
+            p = p.resolve(strict=False)
+
+    # p.is_file() throws an exception in some cases
+    if p.exists() and p.is_file():
         return os.access(
-            test_file, os.W_OK,
+            str(p), os.W_OK,
             effective_ids=(os.access in os.supports_effective_ids))
     else:
         try:
-            fp = open(test_file, 'wb')
-        except OSError as e:
+            fp = p.open('wb')
+        except OSError:
             return False
         else:
             fp.close()
             with suppress(OSError):
-                os.unlink(test_file)
+                p.unlink()
         return True
 
 
@@ -118,4 +166,4 @@ if sys.version_info[0:2] <= (3, 5):
 
 else:
     universal_open = open
-    fspath = os.fspath
+    fspath = os.fspath

src/ocrmypdf/hocrtransform.py

@@ -33,6 +33,7 @@ from reportlab.lib.units import inch
 from xml.etree import ElementTree
 from PIL import Image
 from collections import namedtuple
+from math import atan, sin, cos
 import re
 import argparse
 
@@ -49,13 +50,24 @@ class HocrTransform():
     """
     A class for converting documents from the hOCR format.
     For details of the hOCR format, see:
-    http://docs.google.com/View?docid=dfxcv4vc_67g844kf
+    http://kba.cloud/hocr-spec/
     """
 
+    box_pattern = re.compile(r'bbox((\s+\d+){4})')
+    baseline_pattern = re.compile(r'''
+        baseline \s+ 
+        ([\-\+]?\d*\.?\d*) \s+  # +/- decimal float
+        ([\-\+]?\d+)            # +/- int''', re.VERBOSE)
+    ligatures = str.maketrans({
+        'ff': 'ff',
+        'ffi': 'f‌f‌i',
+        'ffl': 'f‌f‌l',
+        'fi': 'fi',
+        'fl': 'fl',
+    })
+
     def __init__(self, hocrFileName, dpi):
         self.dpi = dpi
-        self.boxPattern = re.compile(r'bbox((\s+\d+){4})')
-
         self.hocr = ElementTree.parse(hocrFileName)
 
         # if the hOCR file has a namespace, ElementTree requires its use to
@@ -104,19 +116,31 @@ class HocrTransform():
             text += element.tail
         return text
 
-    def element_coordinates(self, element):
+    @classmethod
+    def element_coordinates(cls, element):
         """
         Returns a tuple containing the coordinates of the bounding box around
         an element
         """
         out = (0, 0, 0, 0)
         if 'title' in element.attrib:
-            matches = self.boxPattern.search(element.attrib['title'])
+            matches = cls.box_pattern.search(element.attrib['title'])
             if matches:
                 coords = matches.group(1).split()
                 out = Rect._make(int(coords[n]) for n in range(4))
         return out
 
+    @classmethod
+    def baseline(cls, element):
+        """
+        Returns a tuple containing the baseline slope and intercept.
+        """
+        if 'title' in element.attrib:
+            matches = cls.baseline_pattern.search(element.attrib['title'])
+            if matches:
+                return float(matches.group(1)), int(matches.group(2))
+        return (0, 0) 
+
     def pt_from_pixel(self, pxl):
         """
         Returns the quantity in PDF units (pt) given quantity in pixels
@@ -124,20 +148,17 @@ class HocrTransform():
         return Rect._make(
             (c / self.dpi * inch) for c in pxl)
 
-    def replace_unsupported_chars(self, s):
+    @classmethod
+    def replace_unsupported_chars(cls, s):
         """
         Given an input string, returns the corresponding string that:
         - is available in the helvetica facetype
         - does not contain any ligature (to allow easy search in the PDF file)
         """
-        # The 'u' before the character to replace indicates that it is a
-        # unicode character
-        s = s.replace(u"fl", "fl")
-        s = s.replace(u"fi", "fi")
-        return s
+        return s.translate(cls.ligatures)
 
     def to_pdf(self, outFileName, imageFileName=None, showBoundingboxes=False,
-               fontname="Helvetica", invisibleText=False):
+               fontname="Helvetica", invisibleText=False, interwordSpaces=False):
         """
         Creates a PDF file with an image superimposed on top of the text.
         Text is positioned according to the bounding box of the lines in
@@ -172,57 +193,19 @@ class HocrTransform():
                 pdf.rect(
                     pt.x1, self.height - pt.y2, pt.x2 - pt.x1, pt.y2 - pt.y1,
                     fill=1)
+                    
+        found_lines = False
+        for line in self.hocr.findall(
+                ".//%sspan[@class='%s']" % (self.xmlns, "ocr_line")):
+            found_lines = True
+            self._do_line(pdf, line, "ocrx_word", fontname, invisibleText, 
+                          interwordSpaces, showBoundingboxes)
 
-        # check if element with class 'ocrx_word' are available
-        # otherwise use 'ocr_line' as fallback
-        elemclass = "ocr_line"
-        if self.hocr.find(
-                ".//%sspan[@class='ocrx_word']" % (self.xmlns)) is not None:
-            elemclass = "ocrx_word"
-
-        # itterate all text elements
-        # light green for bounding box of word/line
-        pdf.setStrokeColorRGB(1, 0, 0)
-        pdf.setLineWidth(0.5)		# bounding box line width
-        pdf.setDash(6, 3)		# bounding box is dashed
-        pdf.setFillColorRGB(0, 0, 0)  # text in black
-        for elem in self.hocr.findall(
-                ".//%sspan[@class='%s']" % (self.xmlns, elemclass)):
-
-            elemtxt = self._get_element_text(elem).rstrip()
-
-            elemtxt = self.replace_unsupported_chars(elemtxt)
-
-            if len(elemtxt) == 0:
-                continue
-
-            pxl_coords = self.element_coordinates(elem)
-            pt = self.pt_from_pixel(pxl_coords)
-
-            # draw the bbox border
-            if showBoundingboxes:
-                pdf.rect(
-                    pt.x1, self.height - pt.y2, pt.x2 - pt.x1, pt.y2 - pt.y1,
-                    fill=0)
-
-            text = pdf.beginText()
-            fontsize = pt.y2 - pt.y1
-            text.setFont(fontname, fontsize)
-            if invisibleText:
-                text.setTextRenderMode(3)  # Invisible (indicates OCR text)
-
-            # set cursor to bottom left corner of bbox (adjust for dpi)
-            text.setTextOrigin(pt.x1, self.height - pt.y2)
-
-            # scale the width of the text to fill the width of the bbox
-            text.setHorizScale(
-                100 * (pt.x2 - pt.x1) / pdf.stringWidth(
-                    elemtxt, fontname, fontsize))
-
-            # write the text to the page
-            text.textLine(elemtxt)
-            pdf.drawText(text)
-
+        if not found_lines:
+            # Tesseract did not report any lines (just words)
+            root = self.hocr.find(".//%sdiv[@class='%s']" % (self.xmlns, "ocr_page"))
+            self._do_line(pdf, root, "ocrx_word", fontname, invisibleText,
+                          interwordSpaces, showBoundingboxes)
         # put the image on the page, scaled to fill the page
         if imageFileName is not None:
             pdf.drawImage(imageFileName, 0, 0,
@@ -233,6 +216,120 @@ class HocrTransform():
         pdf.save()
 
 
+    @classmethod
+    def polyval(cls, poly, x):
+        return x * poly[0] + poly[1]
+
+
+    def _do_line(self, pdf, line, elemclass, fontname, invisibleText, 
+                 interwordSpaces, showBoundingboxes):
+        pxl_line_coords = self.element_coordinates(line)
+        line_box = self.pt_from_pixel(pxl_line_coords)
+        line_height = line_box.y2 - line_box.y1
+
+        slope, pxl_intercept = self.baseline(line)
+        if abs(slope) < 0.005:
+            slope = 0.0
+        angle = atan(slope)
+        cos_a, sin_a = cos(angle), sin(angle)
+
+        text = pdf.beginText()
+        intercept = pxl_intercept / self.dpi * inch
+
+        # Don't allow the font to break out of the bounding box. Division by
+        # cos_a accounts for extra clearance between the glyph's vertical axis
+        # on a sloped baseline and the edge of the bounding box.
+        fontsize = (line_height - abs(intercept)) / cos_a
+        text.setFont(fontname, fontsize)
+        if invisibleText:
+            text.setTextRenderMode(3)  # Invisible (indicates OCR text)
+
+        # Intercept is normally negative, so this places it above the bottom
+        # of the line box
+        baseline_y2 = self.height - (line_box.y2 + intercept)
+
+        if showBoundingboxes:
+            # draw the baseline in magenta, dashed
+            pdf.setDash()
+            pdf.setStrokeColorRGB(0.95, 0.65, 0.95)
+            pdf.setLineWidth(0.5)
+            # negate slope because it is defined as a rise/run in pixel
+            # coordinates and page coordinates have the y axis flipped
+            pdf.line(line_box.x1, 
+                     baseline_y2,
+                     line_box.x2,
+                     self.polyval((-slope, baseline_y2), 
+                                  line_box.x2 - line_box.x1))
+            # light green for bounding box of word/line
+            pdf.setDash(6, 3)
+            pdf.setStrokeColorRGB(1, 0, 0)
+
+        text.setTextTransform(
+            cos_a, -sin_a, sin_a, cos_a,
+            line_box.x1, baseline_y2
+        )
+        pdf.setFillColorRGB(0, 0, 0)  # text in black
+
+        elements = line.findall(
+                ".//%sspan[@class='%s']" % (self.xmlns, elemclass))
+        for elem in elements:
+            elemtxt = self._get_element_text(elem).strip()
+            elemtxt = self.replace_unsupported_chars(elemtxt)
+            if elemtxt == '':
+                continue
+
+            pxl_coords = self.element_coordinates(elem)
+            box = self.pt_from_pixel(pxl_coords)
+            if interwordSpaces:
+                # if  `--interword-spaces` is true, append a space
+                # to the end of each text element to allow simpler PDF viewers 
+                # such as PDF.js to better recognize words in search and copy 
+                # and paste. Do not remove space from last word in line, even
+                # though it would look better, because it will interfere with
+                # naive text extraction. \n does not work either.
+                elemtxt += ' '
+                box = Rect._make((
+                    box.x1, 
+                    line_box.y1,
+                    box.x2 + pdf.stringWidth(' ', fontname, line_height), 
+                    line_box.y2))
+            box_width = box.x2 - box.x1
+            font_width = pdf.stringWidth(elemtxt, fontname, fontsize)
+
+            # draw the bbox border
+            if showBoundingboxes:
+                pdf.rect(
+                    box.x1,
+                    self.height - line_box.y2,
+                    box_width,
+                    line_height,
+                    fill=0)
+
+            # Adjust relative position of cursor
+            # This is equivalent to:
+            #   text.setTextOrigin(pt.x1, self.height - line_box.y2)
+            # but the former generates a full text reposition matrix (Tm) in the
+            # content stream while this issues a "offset" (Td) command.
+            # .moveCursor() is relative to start of the text line, where the
+            # "text line" means whatever reportlab defines it as. Do not use
+            # use .getCursor(), since moveCursor() rather unintuitively plans 
+            # its moves relative to .getStartOfLine().
+            # For skewed lines, in the text transform we set up a rotated
+            # coordinate system, so we don't have to account for the 
+            # incremental offset. Surprisingly most PDF viewers can handle this.
+            cursor = text.getStartOfLine()
+            dx = box.x1 - cursor[0]
+            dy = baseline_y2 - cursor[1]            
+            text.moveCursor(dx, dy)
+
+            # If reportlab tells us this word is 0 units wide, our best seems
+            # to be to suppress this text
+            if font_width > 0:
+                text.setHorizScale(100 * box_width / font_width)
+                text.textOut(elemtxt)
+        pdf.drawText(text)
+
+
 if __name__ == "__main__":
     parser = argparse.ArgumentParser(description='Convert hocr file to PDF')
     parser.add_argument('-b', '--boundingboxes', action="store_true",
@@ -242,10 +339,12 @@ if __name__ == "__main__":
                         help='Resolution of the image that was OCRed')
     parser.add_argument('-i', '--image', default=None,
                         help='Path to the image to be placed above the text')
+    parser.add_argument('--interword-spaces', action='store_true',
+                         default=False, help='Add spaces between words')
     parser.add_argument('hocrfile', help='Path to the hocr file to be parsed')
     parser.add_argument(
         'outputfile', help='Path to the PDF file to be generated')
     args = parser.parse_args()
 
     hocr = HocrTransform(args.hocrfile, args.resolution)
-    hocr.to_pdf(args.outputfile, args.image, args.boundingboxes)
+    hocr.to_pdf(args.outputfile, args.image, args.boundingboxes, interwordSpaces=args.interword_spaces)

src/ocrmypdf/leptonica.py

@@ -3,6 +3,21 @@
 #
 # © 2013-16: jbarlow83 from Github (https://github.com/jbarlow83)
 #
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+#
 # Python FFI wrapper for Leptonica library
 
 import argparse
@@ -566,35 +581,4 @@ if __name__ == '__main__':
     parser_deskew.set_defaults(func=deskew)
 
     args = parser.parse_args()
-
-    if get_leptonica_version() != u'leptonica-1.69':
-        print("Unexpected leptonica version: %s" % getLeptonicaVersion())
-
-    args.func(args)
-
-
-def test_skew_angle():
-    from PIL import Image, ImageDraw
-    from tempfile import NamedTemporaryFile
-
-    im = Image.new(mode='1', size=(1000, 1000), color=1)
-
-    draw = ImageDraw.Draw(im)
-    for n in range(20):
-        draw.line([(50, 25 + 50*n), (950, 25 + 50*n)], width=1)
-    del draw
-
-    test_angles = [0.1 * ang for ang in range(1, 10)] + \
-                  [float(ang) for ang in range(1, 7)]
-    test_angles += [-ang for ang in test_angles]
-    test_angles = sorted(test_angles)
-
-    for rotate_angle in test_angles:
-        rotated_im = im.rotate(rotate_angle)
-        with NamedTemporaryFile(prefix='lept-skew', suffix='.png', delete=True) as tmpfile:
-            rotated_im.save(tmpfile)
-            pix = pixRead(tmpfile.name)
-            angle, confidence = pixFindSkew(pix)
-            print('{0} {1}  {2}'.format(rotate_angle, angle, confidence), file=sys.stderr)
-
-
+    args.func(args)

src/ocrmypdf/lib/__init__.py

@@ -0,0 +1,28 @@
+# © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+
+"""Bindings to external libraries"""
+
+import os as _os
+
+try:
+    import fitz
+except ImportError:
+    fitz = None
+
+if _os.environ.get('_OCRMYPDF_NO_FITZ'):
+    fitz = None

src/ocrmypdf/lib/_leptonica.py

@@ -0,0 +1,10 @@
+# auto-generated file
+import _cffi_backend
+
+ffi = _cffi_backend.FFI('ocrmypdf.lib._leptonica',
+    _version = 0x2601,
+    _types = b'\x00\x00\x0F\x0D\x00\x00\xBB\x03\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\xBE\x03\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\xBA\x03\x00\x00\x0F\x03\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x0D\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x0D\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x0D\x01\x00\x00\x02\x03\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x0D\x01\x00\x00\x0D\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\x08\x11\x00\x00\x00\x0F\x00\x00\x01\x0D\x00\x00\xC7\x03\x00\x00\x1C\x01\x00\x00\x00\x0F\x00\x00\xBD\x0D\x00\x00\x00\x0F\x00\x00\x49\x0D\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x1F\x03\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x6E\x11\x00\x00\x6E\x11\x00\x00\x6E\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x6E\x11\x00\x00\x6E\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x49\x11\x00\x00\x49\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x0D\x01\x00\x00\x07\x01\x00\x00\x49\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x6E\x11\x00\x00\x6E\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x0D\x01\x00\x00\x01\x03\x00\x00\x9D\x11\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x01\x11\x00\x00\xC6\x03\x00\x00\x65\x03\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\x08\x11\x00\x00\x01\x11\x00\x00\x07\x01\x00\x00\x07\x01\x00\x00\x00\x0F\x00\x00\x02\x0D\x00\x00\xC4\x03\x00\x00\xA3\x11\x00\x00\x01\x11\x00\x00\x0D\x01\x00\x00\x00\x0F\x00\x00\xCA\x0D\x00\x00\x10\x11\x00\x00\x00\x0F\x00\x00\xCA\x0D\x00\x00\x9D\x11\x00\x00\x00\x0F\x00\x00\xCA\x0D\x00\x00\xCA\x03\x00\x00\x00\x0F\x00\x00\x00\x09\x00\x00\x01\x09\x00\x00\x02\x09\x00\x00\xBE\x03\x00\x00\x02\x01\x00\x00\x0E\x01\x00\x00\x0B\x01\x00\x00\x05\x01\x00\x00\x03\x01\x00\x00\xBC\x03\x00\x00\xC5\x03\x00\x00\x04\x01\x00\x00\xC7\x03\x00\x00\x08\x01\x00\x00\x0C\x01\x00\x00\x06\x01\x00\x00\x00\x01',
+    _globals = (b'\x00\x00\xB1\x23boxDestroy',0,b'\x00\x00\x67\x23getLeptonicaVersion',0,b'\x00\x00\xB7\x23lept_free',0,b'\x00\x00\x69\x23makePixelSumTab8',0,b'\x00\x00\x16\x23pixAnd',0,b'\x00\x00\x23\x23pixBackgroundNorm',0,b'\x00\x00\x1B\x23pixCleanBackgroundToWhite',0,b'\x00\x00\x0D\x23pixClipRectangle',0,b'\x00\x00\x8D\x23pixColorFraction',0,b'\x00\x00\x59\x23pixColorMagnitude',0,b'\x00\x00\x0A\x23pixConvertRGBToLuminance',0,b'\x00\x00\x6B\x23pixCorrelationBinary',0,b'\x00\x00\x80\x23pixCountPixels',0,b'\x00\x00\x63\x23pixDeserializeFromMemory',0,b'\x00\x00\x50\x23pixDeskew',0,b'\x00\x00\xB4\x23pixDestroy',0,b'\x00\x00\x0A\x23pixEndianByteSwapNew',0,b'\x00\x00\x00\x23pixFindPageForeground',0,b'\x00\x00\x7B\x23pixFindSkew',0,b'\x00\x00\x2F\x23pixGammaTRC',0,b'\x00\x00\x70\x23pixGetAverageMaskedRGB',0,b'\x00\x00\x36\x23pixGlobalNormRGB',0,b'\x00\x00\x12\x23pixInvert',0,b'\x00\x00\x54\x23pixMaskOverColorPixels',0,b'\x00\x00\x85\x23pixNumSignificantGrayColors',0,b'\x00\x00\x96\x23pixOtsuAdaptiveThreshold',0,b'\x00\x00\x3E\x23pixOtsuThreshOnBackgroundNorm',0,b'\x00\x00\x60\x23pixRead',0,b'\x00\x00\x50\x23pixRemoveColormap',0,b'\x00\x00\x12\x23pixRotate180',0,b'\x00\x00\x50\x23pixRotateOrth',0,b'\x00\x00\x4B\x23pixScale',0,b'\x00\x00\xA0\x23pixSerializeToMemory',0,b'\x00\x00\xA5\x23pixWriteImpliedFormat',0,b'\x00\x00\xAB\x23pixWriteMemPng',0),
+    _struct_unions = ((b'\x00\x00\x00\xBA\x00\x00\x00\x02Box',b'\x00\x00\x02\x11x',b'\x00\x00\x02\x11y',b'\x00\x00\x02\x11w',b'\x00\x00\x02\x11h',b'\x00\x00\xC7\x11refcount'),(b'\x00\x00\x00\xBB\x00\x00\x00\x02Pix',b'\x00\x00\xC7\x11w',b'\x00\x00\xC7\x11h',b'\x00\x00\xC7\x11d',b'\x00\x00\xC7\x11spp',b'\x00\x00\xC7\x11wpl',b'\x00\x00\xC7\x11refcount',b'\x00\x00\x02\x11xres',b'\x00\x00\x02\x11yres',b'\x00\x00\x02\x11informat',b'\x00\x00\x02\x11special',b'\x00\x00\xBD\x11text',b'\x00\x00\xC3\x11colormap',b'\x00\x00\xC6\x11data'),(b'\x00\x00\x00\xBC\x00\x00\x00\x02PixColormap',b'\x00\x00\xB8\x11array',b'\x00\x00\x02\x11depth',b'\x00\x00\x02\x11nalloc',b'\x00\x00\x02\x11n')),
+    _typenames = (b'\x00\x00\x00\xBABOX',b'\x00\x00\x00\xBBPIX',b'\x00\x00\x00\xBCPIXCMAP',b'\x00\x00\x00\x1Fl_float32',b'\x00\x00\x00\xBFl_float64',b'\x00\x00\x00\xC1l_int16',b'\x00\x00\x00\x02l_int32',b'\x00\x00\x00\xC0l_int64',b'\x00\x00\x00\xC2l_int8',b'\x00\x00\x00\xC9l_uint16',b'\x00\x00\x00\xC7l_uint32',b'\x00\x00\x00\xC8l_uint64',b'\x00\x00\x00\xC5l_uint8'),
+)

src/ocrmypdf/lib/compile_leptonica.py

@@ -1,4 +1,20 @@
+#!/usr/bin/env python3
 # © 2017 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from cffi import FFI
 

src/ocrmypdf/pdfa.py

@@ -1,12 +1,30 @@
-#!/usr/bin/env python3
 # © 2015 James R. Barlow: github.com/jbarlow83
 #
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
+
 # Generate a PDFA_def.ps file for Ghostscript >= 9.14
 
 from string import Template
-import codecs
+from binascii import hexlify
+from datetime import datetime
+from xml.parsers.expat import ExpatError
 import pkg_resources
 import PyPDF2 as pypdf
+from defusedxml.minidom import parseString as defused_parseString
+from unittest.mock import patch
 
 ICC_PROFILE_RELPATH = 'data/sRGB.icc'
 
@@ -79,12 +97,87 @@ def encode_text_string(s: str) -> str:
         return ''
 
     utf16_bytes = s.encode('utf-16be')
-    ascii_hex_bytes = codecs.encode(b'\xfe\xff' + utf16_bytes, 'hex')
+    ascii_hex_bytes = hexlify(b'\xfe\xff' + utf16_bytes)
     ascii_hex_str = ascii_hex_bytes.decode('ascii').lower()
     return ascii_hex_str
 
 
+def encode_pdf_date(d: datetime) -> str:
+    """Encode Python datetime object as PDF date string
+
+    From Adobe pdfmark manual:    
+    (D:YYYYMMDDHHmmSSOHH'mm')
+    D: is an optional prefix. YYYY is the year. All fields after the year are
+    optional. MM is the month (01-12), DD is the day (01-31), HH is the
+    hour (00-23), mm are the minutes (00-59), and SS are the seconds
+    (00-59). The remainder of the string defines the relation of local
+    time to GMT. O is either + for a positive difference (local time is
+    later than GMT) or - (minus) for a negative difference. HH' is the
+    absolute value of the offset from GMT in hours, and mm' is the
+    absolute value of the offset in minutes. If no GMT information is
+    specified, the relation between the specified time and GMT is
+    considered unknown. Regardless of whether or not GMT
+    information is specified, the remainder of the string should specify
+    the local time.
+    """
+
+    pdfmark_date_fmt = r'%Y%m%d%H%M%S'
+    s = d.strftime(pdfmark_date_fmt)
+
+    tz = d.strftime('%z')
+    if tz == 'Z':
+        s += "+00'00'"
+    elif tz != '':
+        sign, tz_hours, tz_mins = tz[0], tz[1:3], tz[3:5]
+        s += "{}{}'{}'".format(sign, tz_hours, tz_mins)
+    else:
+        raise ValueError("Naive timezone not supported")
+    return s
+
+
+def decode_pdf_date(s: str) -> datetime:
+    pdfmark_date_fmts = (
+        r'%Y%m%d%H%M%S%z',  # +0430 etc
+        r'%Y%m%d%H%M%S',    # no time zone
+        r'%Y%m%d%H%M%SZ')   # trailing Z
+
+    if s.startswith('D:'):
+        s = s[2:]
+    s = s.replace("'", "")  # Remove apos from PDF time strings
+    for fmt in pdfmark_date_fmts:
+        try:
+            return datetime.strptime(s, fmt)
+        except ValueError:
+            continue
+    return None
+
+
+def _get_pdfmark_dates(pdfmark):
+    """Encode dates for pdfmark Postscript.  The best way to deal with a
+    missing date entry is set it to null, because if the key is omitted 
+    Ghostscript will set it to now - we do not want to erase the fact that
+    the value was unknown.  Setting to an empty string breaks Ghostscript
+    9.22 as reported here:
+    https://bugs.ghostscript.com/show_bug.cgi?id=699182
+    """
+
+    for key in ('/CreationDate', '/ModDate'):
+        if key not in pdfmark:
+            continue
+        if pdfmark[key].strip() == '':
+            yield '  {} null'.format(key)
+            continue
+        date_str = pdfmark[key]
+        if date_str.startswith('D:'):
+            date_str = date_str[2:]
+        yield '  {} (D:{})'.format(key, date_str)
+
+
 def _get_pdfa_def(icc_profile, icc_identifier, pdfmark):
+    """Create a Postscript file for Ghostscript.  pdfmark contains the various
+    objects as strings; these must be encoded in ASCII, and dates have a 
+    special format."""
+
     # Ghostscript <= 9.21 has a bug where null entries in DOCINFO might produce
     # ERROR: VMerror (-25) on closing pdfwrite device.
     # https://bugs.ghostscript.com/show_bug.cgi?id=697684
@@ -93,12 +186,12 @@ def _get_pdfa_def(icc_profile, icc_identifier, pdfmark):
     docinfo_line_template = '  {key} <{value}>'
 
     def docinfo_gen():
+        yield from _get_pdfmark_dates(pdfmark)
         for key in docinfo_keys:
             if key in pdfmark and pdfmark[key].strip() != '':
                 line = docinfo_line_template.format(
                     key=key, value=encode_text_string(pdfmark[key]))
                 yield line
-
     docinfo = '\n'.join(docinfo_gen())
 
     t = Template(pdfa_def_template)
@@ -131,9 +224,14 @@ def file_claims_pdfa(filename):
 
     This checks if the XMP metadata contains a PDF/A marker.
     """
-
     pdf = pypdf.PdfFileReader(filename)
-    xmp = pdf.getXmpMetadata()
+    try:
+        # Monkeypatch PyPDF2 to use defusedxml as its XML parser, for safety
+        with patch('xml.dom.minidom.parseString', new=defused_parseString):
+            xmp = pdf.getXmpMetadata()
+    except ExpatError:
+        return {'pass': False, 'output': 'pdf',
+                'conformance': 'Invalid XML metadata'}
 
     try:
         pdfa_nodes = xmp.getNodesInNamespace(

src/ocrmypdf/pdfinfo.py

@@ -1,18 +1,37 @@
 #!/usr/bin/env python3
 # © 2015 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from subprocess import Popen, PIPE
 from decimal import Decimal
 from math import hypot, isclose
 import re
 import sys
-import PyPDF2 as pypdf
 from collections import namedtuple
 from collections.abc import MutableMapping, Mapping
 import warnings
 from pathlib import Path
 from enum import Enum
-from .helpers import universal_open
+from contextlib import contextmanager
+
+import PyPDF2 as pypdf
+from .lib import fitz
+from .helpers import universal_open, fspath
+
 
 
 matrix_mult = pypdf.pdf.utils.matrixMultiply
@@ -101,7 +120,8 @@ XobjectSettings = namedtuple('XobjectSettings',
 InlineSettings = namedtuple('InlineSettings',
     ['settings', 'shorthand', 'stack_depth'])
 
-ContentsInfo = namedtuple('ContentsInfo', ['xobject_settings', 'inline_images'])
+ContentsInfo = namedtuple('ContentsInfo', 
+    ['xobject_settings', 'inline_images', 'found_text'])
 
 
 def _normalize_stack(operations):
@@ -148,6 +168,7 @@ def _interpret_contents(contentstream, initial_shorthand=UNIT_SQUARE):
     ctm = _matrix_from_shorthand(initial_shorthand)
     xobject_settings = []
     inline_images = []
+    found_text = False
 
     for n, op in enumerate(_normalize_stack(operations)):
         operands, command = op
@@ -177,10 +198,14 @@ def _interpret_contents(contentstream, initial_shorthand=UNIT_SQUARE):
                 settings=settings, shorthand=_shorthand_from_matrix(ctm),
                 stack_depth=len(stack))
             inline_images.append(inline)
+        elif command in (b'Tj', b'TJ', b'"', b"'"):
+            found_text = True
+
 
     return ContentsInfo(
         xobject_settings=xobject_settings,
-        inline_images=inline_images)
+        inline_images=inline_images,
+        found_text=found_text)
 
 
 def _get_dpi(ctm_shorthand, image_size):
@@ -525,32 +550,47 @@ def _find_images(*, pdf, container, shorthand=None):
     yield from _find_form_xobject_images(pdf, container, contentsinfo)
 
 
-def _page_has_text(pdf, page):
-    if not '/Contents' in page:
+def _naive_find_text(*, pdf, page):
+    if not(page.get('/Type') == '/Page' and '/Contents' in page):
+        # Not a page, or has no /Contents => no text
         return False
 
-    # Simple test
-    text = page.extractText()
-    if text.strip() != '':
+    # First we check the main content stream    
+    contentstream = pypdf.pdf.ContentStream(page.getContents(), pdf)
+    contentsinfo = _interpret_contents(contentstream, UNIT_SQUARE)
+    if contentsinfo.found_text:
         return True
 
-    # More nuanced test to deal with quirks of Tesseract PDF generation
-    # Check if there's a Glyphless font
-    try:
-        font = page['/Resources']['/Font']
-    except KeyError:
-        pass
-    else:
-        font_objects = list(font.keys())
-        for font_object in font_objects:
-            basefont = font[font_object]['/BaseFont']
-            if basefont.endswith('GlyphLessFont'):
-                return True
-
+    # Then see if there is a Form XObject with with a content stream
+    # that might have text.  For full completeness we should recursively
+    # search nested Form XObjects, as we do with images.  But that is
+    # rare.
+    if '/Resources' in page:
+        resources = page['/Resources']
+        if '/XObject' in resources:    
+            for xobj in resources['/XObject']:
+                candidate = resources['/XObject'][xobj]
+                if candidate['/Subtype'] != '/Form':
+                    continue
+                form_xobject = candidate                
+                # Content stream is attached to Form XObject dictionary
+                contentstream = pypdf.pdf.ContentStream(form_xobject, pdf)
+                sub_contentsinfo = _interpret_contents(
+                    contentstream, UNIT_SQUARE)
+                if sub_contentsinfo.found_text:
+                    return True
     return False
 
 
-def _pdf_get_pageinfo(pdf, pageno: int):
+def _page_has_text(infile, pageno):
+    doc = fitz.Document(infile)
+    text = doc.getPageText(pageno)
+    if text.strip() != '':
+        return True
+    return False
+
+
+def _pdf_get_pageinfo(pdf, pageno: int, infile):
     pageinfo = {}
     pageinfo['pageno'] = pageno
     pageinfo['images'] = []
@@ -562,7 +602,10 @@ def _pdf_get_pageinfo(pdf, pageno: int):
 
     page = pdf.pages[pageno]
 
-    pageinfo['has_text'] = _page_has_text(pdf, page)
+    if fitz:
+        pageinfo['has_text'] = _page_has_text(str(infile), pageno)
+    else:
+        pageinfo['has_text'] = _naive_find_text(pdf=pdf, page=page)
 
     width_pt = page.mediaBox.getWidth()
     height_pt = page.mediaBox.getHeight()
@@ -596,13 +639,14 @@ def _pdf_get_pageinfo(pdf, pageno: int):
 def _pdf_get_all_pageinfo(infile):
     with universal_open(infile, 'rb') as f:
         pdf = pypdf.PdfFileReader(f)
-        return [PageInfo(pdf, n) for n in range(pdf.numPages)]
+        return [PageInfo(pdf, n, infile) for n in range(pdf.numPages)]
 
 
 class PageInfo:
-    def __init__(self, pdf, pageno):
+    def __init__(self, pdf, pageno, infile):
         self._pageno = pageno
-        self._pageinfo = _pdf_get_pageinfo(pdf, pageno)
+        self._infile = infile
+        self._pageinfo = _pdf_get_pageinfo(pdf, pageno, infile)
 
     @property
     def pageno(self):
@@ -662,10 +706,6 @@ class PageInfo:
         else:
             return '1.5'
 
-    @property
-    def images(self):
-        return self._pageinfo['images']
-
     def __repr__(self):
         return (
             '<PageInfo '
@@ -683,6 +723,10 @@ class PdfInfo:
     def __init__(self, infile):
         self._infile = infile
         self._pages = _pdf_get_all_pageinfo(infile)
+        if fitz:
+            self._toc = fitz.Document(fspath(infile)).getToC()
+        else:
+            self._toc = []
 
     @property
     def pages(self):
@@ -697,6 +741,16 @@ class PdfInfo:
     def has_userunit(self):
         return any(page.userunit != 1.0 for page in self.pages)
 
+    @property
+    def filename(self):
+        if not isinstance(self._infile, (str, Path)):
+            raise NotImplementedError("can't get filename from stream")
+        return self._infile
+
+    @property
+    def table_of_contents(self):
+        return self._toc
+
     def __getitem__(self, item):
         return self._pages[item]
 

src/ocrmypdf/pipeline.py

@@ -1,27 +1,48 @@
-#!/usr/bin/env python3
 # © 2016 James R. Barlow: github.com/jbarlow83
+#
+# This file is part of OCRmyPDF.
+#
+# OCRmyPDF is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 3 of the License, or
+# (at your option) any later version.
+#
+# OCRmyPDF is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with OCRmyPDF.  If not, see <http://www.gnu.org/licenses/>.
 
 from contextlib import suppress
+from shutil import copyfileobj
+from pathlib import Path
+from datetime import datetime, timezone
 import sys
 import os
 import shutil
-import img2pdf
 import re
-import PyPDF2 as pypdf
-from PIL import Image
 
+import img2pdf
+import PyPDF2 as pypdf
+
+from PIL import Image
 from ruffus import formatter, regex, Pipeline, suffix
 
 from .hocrtransform import HocrTransform
 from .pdfinfo import PdfInfo, Encoding, Colorspace
-from .pdfa import generate_pdfa_ps
+from .pdfa import generate_pdfa_ps, encode_pdf_date
 from .helpers import re_symlink, is_iterable_notstr, page_number
 from .exec import ghostscript, tesseract, qpdf
-from .exceptions import *
+from .lib import fitz
+from .exceptions import PdfMergeFailedError, UnsupportedImageFormatError, \
+    DpiError, PriorOcrFoundError, InputFileError
 from . import leptonica
 from . import PROGRAM_NAME, VERSION
 
 
+
 VECTOR_PAGE_DPI = 400
 
 # -------------
@@ -159,7 +180,7 @@ def _pdf_guess_version(input_file, search_window=1024):
 
     with open(input_file, 'rb') as f:
         signature = f.read(1024)
-    m = re.search(b'%PDF-(\d\.\d)', signature)
+    m = re.search(br'%PDF-(\d\.\d)', signature)
     if m:
         return m.group(1)
     return ''
@@ -186,13 +207,19 @@ def triage(
     triage_image_file(input_file, output_file, log, options)
 
 
-def repair_pdf(
+def repair_and_parse_pdf(
         input_file,
         output_file,
         log,
         context):
     options = context.get_options()
-    qpdf.repair(input_file, output_file, log)
+    if not options.skip_repair:
+        log.debug("Beginning qpdf repair...")
+        qpdf.repair(input_file, output_file, log)
+        log.debug("Repair OK; beginning parse...")
+    else:
+        re_symlink(input_file, output_file, log)
+
     pdfinfo = PdfInfo(output_file)
 
     if pdfinfo.has_userunit and options.output_type == 'pdfa':
@@ -204,12 +231,19 @@ def repair_pdf(
             "output these files.)  Use --output-type=pdf instead."
         )
         raise InputFileError()
+    
+    if len(pdfinfo.pages) > 2000 and sys.version_info[0:2] <= (3, 5):
+        log.warning(
+            "Performance regressions are known occur with Python 3.5 for "
+            "high page count files.  Python 3.6 or newer is recommended."
+        )
 
     context.set_pdfinfo(pdfinfo)
     log.debug(pdfinfo)
 
 
 def get_pageinfo(input_file, context):
+    "Get zero-based page info implied by filename, e.g. 000002.pdf -> 1"
     pageno = page_number(input_file) - 1
     pageinfo = context.get_pdfinfo()[pageno]
     return pageinfo
@@ -244,7 +278,30 @@ def get_canvas_square_dpi(pageinfo, options):
 def is_ocr_required(pageinfo, log, options):
     page = pageinfo.pageno + 1
     ocr_required = True
-    if not pageinfo.images:
+
+    if pageinfo.has_text:
+        msg = "{0:4d}: page already has text! – {1}"
+
+        if not options.force_ocr and not options.skip_text:
+            log.error(msg.format(page,
+                                 "aborting (use --force-ocr to force OCR)"))
+            raise PriorOcrFoundError()
+        elif options.force_ocr:
+            log.info(msg.format(page,
+                                "rasterizing text and running OCR anyway"))
+            ocr_required = True
+        elif options.skip_text:
+            log.info(msg.format(page,
+                                "skipping all processing on this page"))
+            ocr_required = False
+    elif not pageinfo.images and not options.lossless_reconstruction:
+        # We found a page with no images and no text. That means it may
+        # have vector art that the user wants to OCR. If we determined
+        # lossless reconstruction is not possible then we have to rasterize
+        # the image. So if OCR is being forced, take that to mean YES, go 
+        # ahead and rasterize. If not forced, then pretend there's no text
+        # on the page at all so we don't lose anything.
+        # This could be made smarter by explicitly searching for vector art.
         if options.force_ocr and options.oversample:
             # The user really wants to reprocess this file
             log.info(
@@ -263,23 +320,9 @@ def is_ocr_required(pageinfo, log, options):
         else:
             log.info(
                 "{0:4d}: page has no images - "
-                "skipping all processing on this page".format(page))
-            ocr_required = False
-
-    elif pageinfo.has_text:
-        msg = "{0:4d}: page already has text! – {1}"
-
-        if not options.force_ocr and not options.skip_text:
-            log.error(msg.format(page,
-                                 "aborting (use --force-ocr to force OCR)"))
-            raise PriorOcrFoundError()
-        elif options.force_ocr:
-            log.info(msg.format(page,
-                                "rasterizing text and running OCR anyway"))
-            ocr_required = True
-        elif options.skip_text:
-            log.info(msg.format(page,
-                                "skipping all processing on this page"))
+                "skipping all processing on this page to avoid losing detail. "
+                "Use --force-ocr if you wish to perform OCR on pages that "
+                "have vector content.".format(page))
             ocr_required = False
 
     if ocr_required and options.skip_big and pageinfo.images:
@@ -293,7 +336,7 @@ def is_ocr_required(pageinfo, log, options):
     return ocr_required
 
 
-def split_pages(
+def pre_split_pages(
         input_files,
         output_files,
         log,
@@ -319,20 +362,45 @@ def split_pages(
 
     pdfinfo = context.get_pdfinfo()
     npages = len(pdfinfo)
-    qpdf.split_pages(input_file, work_folder, npages)
 
-    from glob import glob
-    for filename in glob(os.path.join(work_folder, '*.page.pdf')):
-        pageinfo = get_pageinfo(filename, context)
+    # Ruffus needs to see a file for any task it generates, so create
+    # empty placeholders for every page.
+    for n in range(npages):
+        page = Path(work_folder) / '{0:06d}.presplit.pdf'.format(n + 1)
+        page.touch()
 
+
+def split_page(
+        placeholder_file,
+        output_file,
+        log,
+        context):
+    pageno = page_number(placeholder_file) - 1
+    input_pdf = context.get_pdfinfo().filename
+    qpdf.extract_page(input_pdf, output_file, pageno)
+
+
+def ocr_or_skip(
+        input_files,
+        output_files,
+        log,
+        context):
+    options = context.get_options()
+    work_folder = context.get_work_folder()
+    pdfinfo =  context.get_pdfinfo()
+
+    for input_file in input_files:
+        pageno = page_number(input_file) - 1
+        pageinfo = pdfinfo[pageno]
         alt_suffix = \
             '.ocr.page.pdf' if is_ocr_required(pageinfo, log, options) \
             else '.skip.page.pdf'
+
         re_symlink(
-            filename,
+            input_file,
             os.path.join(
                 work_folder,
-                os.path.basename(filename)[0:6] + alt_suffix),
+                os.path.basename(input_file)[0:6] + alt_suffix),
             log)
 
 
@@ -563,19 +631,18 @@ def select_visible_page_image(
         log.debug('{:4d}: JPEG input -> JPEG output'.format(
             page_number(image)))
         # If all images were JPEGs originally, produce a JPEG as output
-        im = Image.open(image)
+        with Image.open(image) as im:
+            # At this point the image should be a .png, but deskew, unpaper
+            # might have removed the DPI information. In this case, fall back to
+            # square DPI used to rasterize. When the preview image was
+            # rasterized, it was also converted to square resolution, which is
+            # what we want to give tesseract, so keep it square.
+            fallback_dpi = get_page_square_dpi(pageinfo, options)
+            dpi = im.info.get('dpi', (fallback_dpi, fallback_dpi))
 
-        # At this point the image should be a .png, but deskew, unpaper might
-        # have removed the DPI information. In this case, fall back to square
-        # DPI used to rasterize. When the preview image was rasterized, it
-        # was also converted to square resolution, which is what we want to
-        # give tesseract, so keep it square.
-        fallback_dpi = get_page_square_dpi(pageinfo, options)
-        dpi = im.info.get('dpi', (fallback_dpi, fallback_dpi))
-
-        # Pillow requires integer DPI
-        dpi = round(dpi[0]), round(dpi[1])
-        im.save(output_file, format='JPEG', dpi=dpi)
+            # Pillow requires integer DPI
+            dpi = round(dpi[0]), round(dpi[1])
+            im.save(output_file, format='JPEG', dpi=dpi)
     else:
         re_symlink(image, output_file, log)
 
@@ -597,25 +664,25 @@ def select_image_layer(
         log.debug("{:4d}: page eligible for lossless reconstruction".format(
             page_number(page_pdf)))
         re_symlink(page_pdf, output_file, log)
-    else:
-        pageinfo = get_pageinfo(image, context)
+        return
 
-        # We rasterize a square DPI version of each page because most image
-        # processing tools don't support rectangular DPI. Use the square DPI
-        # as it accurately describes the image. It would be possible to
-        # resample the image at this stage back to non-square DPI to more
-        # closely resemble the input, except that the hocr renderer does not
-        # understand non-square DPI. The sandwich renderer would be fine.
-        dpi = get_page_square_dpi(pageinfo, options)
-        layout_fun = img2pdf.get_fixed_dpi_layout_fun((dpi, dpi))
+    pageinfo = get_pageinfo(image, context)
 
-        with open(image, 'rb') as imfile, \
-                open(output_file, 'wb') as pdf:
-            log.debug('{:4d}: convert'.format(page_number(page_pdf)))
-            img2pdf.convert(
-                imfile, with_pdfrw=False,
-                layout_fun=layout_fun, outputstream=pdf)
-            log.debug('{:4d}: convert done'.format(page_number(page_pdf)))
+    # We rasterize a square DPI version of each page because most image
+    # processing tools don't support rectangular DPI. Use the square DPI as it
+    # accurately describes the image. It would be possible to resample the image
+    # at this stage back to non-square DPI to more closely resemble the input,
+    # except that the hocr renderer does not understand non-square DPI. The
+    # sandwich renderer would be fine.
+    dpi = get_page_square_dpi(pageinfo, options)
+    layout_fun = img2pdf.get_fixed_dpi_layout_fun((dpi, dpi))
+
+    with open(image, 'rb') as imfile, open(output_file, 'wb') as pdf:
+        log.debug('{:4d}: convert'.format(page_number(page_pdf)))
+        img2pdf.convert(
+            imfile, with_pdfrw=False,
+            layout_fun=layout_fun, outputstream=pdf)
+        log.debug('{:4d}: convert done'.format(page_number(page_pdf)))
 
 
 def render_hocr_page(
@@ -630,8 +697,8 @@ def render_hocr_page(
 
     hocrtransform = HocrTransform(hocr, dpi)
     hocrtransform.to_pdf(output_file, imageFileName=None,
-                         showBoundingboxes=False, invisibleText=True)
-
+                         showBoundingboxes=False, invisibleText=True,
+                         interwordSpaces=True)
 
 def flatten_groups(groups):
     for obj in groups:
@@ -655,8 +722,8 @@ def render_hocr_debug_page(
 
     hocrtransform = HocrTransform(hocr, dpi)
     hocrtransform.to_pdf(output_file, imageFileName=None,
-                         showBoundingboxes=True, invisibleText=False)
-
+                         showBoundingboxes=True, invisibleText=False,
+                         interwordSpaces=True)
 
 def combine_layers(
         infiles,
@@ -668,8 +735,8 @@ def combine_layers(
     image = next(ii for ii in flatten_groups(infiles)
                  if ii.endswith('.image-layer.pdf'))
 
-    pdf_text = pypdf.PdfFileReader(open(text, "rb"))
-    pdf_image = pypdf.PdfFileReader(open(image, "rb"))
+    pdf_text = pypdf.PdfFileReader(text)
+    pdf_image = pypdf.PdfFileReader(image)
 
     page_text = pdf_text.getPage(0)
 
@@ -811,12 +878,8 @@ def get_pdfmark(base_pdf, options):
         except (KeyError, TypeError):
             return ''
 
-    pdfmark = {
-        '/Title': from_document_info('/Title'),
-        '/Author': from_document_info('/Author'),
-        '/Keywords': from_document_info('/Keywords'),
-        '/Subject': from_document_info('/Subject'),
-    }
+    pdfmark = {k: from_document_info(k) for k in 
+        ('/Title', '/Author', '/Keywords', '/Subject', '/CreationDate')}
     if options.title:
         pdfmark['/Title'] = options.title
     if options.author:
@@ -837,6 +900,7 @@ def get_pdfmark(base_pdf, options):
         PROGRAM_NAME, VERSION,
         renderer_tag,
         tesseract.version())
+    pdfmark['/ModDate'] = encode_pdf_date(datetime.now(timezone.utc))
     return pdfmark
 
 
@@ -863,12 +927,21 @@ def skip_page(
     re_symlink(input_file, output_file, log)
 
 
-def merge_pages_ghostscript(
+def _merge_pages_common(
         input_files_groups,
         output_file,
         log,
         context):
-    options = context.get_options()
+    """Determine ordered list of PDF pages to merge. Returns PDF from which
+    metadata should be drawn if present (for qpdf)."""
+
+    input_files = list(f for f in flatten_groups(input_files_groups)
+                       if not f.endswith('.txt'))
+    metadata_file = next(
+        (ii for ii in input_files if ii.endswith('.repaired.pdf')), None)
+    if metadata_file in input_files:
+        input_files.remove(metadata_file)
+
     def input_file_order(s):
         '''Sort order: All rendered pages followed
         by their debug page, if any, followed by Postscript stub.
@@ -882,19 +955,35 @@ def merge_pages_ghostscript(
             key += 1
         return key
 
-    input_files = (f for f in flatten_groups(input_files_groups)
-                   if not f.endswith('.txt'))
     pdf_pages = sorted(input_files, key=input_file_order)
     log.debug("Final pages: " + "\n".join(pdf_pages))
+
+    return pdf_pages, metadata_file
+
+
+def merge_pages_ghostscript(
+        input_files_groups,
+        output_file,
+        log,
+        context):
+    options = context.get_options()
+    pdf_pages, _ = _merge_pages_common(
+        input_files_groups, output_file, log, context)
     input_pdfinfo = context.get_pdfinfo()
     ghostscript.generate_pdfa(
         pdf_version=input_pdfinfo.min_version,
         pdf_pages=pdf_pages,
-        output_file=output_file,
+        output_file=output_file + '_toc.pdf',
         compression=options.pdfa_image_compression,
         log=log,
         threads=options.jobs or 1,
         pdfa_part=('1' if options.output_type == 'pdfa-1' else '2'))
+    if fitz:
+        doc = fitz.Document(output_file + '_toc.pdf')
+        doc.setToC(input_pdfinfo.table_of_contents)
+        doc.save(output_file)
+    else:
+        os.replace(output_file + '_toc.pdf', output_file)
 
 
 def merge_pages_qpdf(
@@ -903,23 +992,8 @@ def merge_pages_qpdf(
         log,
         context):
     options = context.get_options()
-
-    input_files = list(f for f in flatten_groups(input_files_groups)
-                       if not f.endswith('.txt'))
-    metadata_file = next(
-        (ii for ii in input_files if ii.endswith('.repaired.pdf')))
-    input_files.remove(metadata_file)
-
-    def input_file_order(s):
-        '''Sort order: All rendered pages followed
-        by their debug page.'''
-        key = page_number(s) * 10
-        if 'debug' in os.path.basename(s):
-            key += 1
-        return key
-
-    pdf_pages = sorted(input_files, key=input_file_order)
-    log.debug("Final pages: " + "\n".join(pdf_pages))
+    pdf_pages, metadata_file = _merge_pages_common(
+        input_files_groups, output_file, log, context)
 
     reader_metadata = pypdf.PdfFileReader(metadata_file)
     pdfmark = get_pdfmark(reader_metadata, options)
@@ -928,7 +1002,8 @@ def merge_pages_qpdf(
     first_page = pypdf.PdfFileReader(pdf_pages[0])
 
     writer = pypdf.PdfFileWriter()
-    writer._header = b'%PDF-' + _pdf_guess_version(pdf_pages[0])  # copy version from source
+    # copy version from source
+    writer._header = b'%PDF-' + _pdf_guess_version(pdf_pages[0])
     writer.appendPagesFromReader(first_page)
     writer.addMetadata(pdfmark)
     writer_file = pdf_pages[0].replace('.pdf', '.metadata.pdf')
@@ -942,6 +1017,36 @@ def merge_pages_qpdf(
                log=log)
 
 
+def merge_pages_mupdf(
+        input_files_groups,
+        output_file,
+        log,
+        context):
+    assert fitz
+
+    options = context.get_options()
+
+    pdf_pages, metadata_file = _merge_pages_common(
+        input_files_groups, output_file, log, context)
+
+    doc = fitz.Document()
+
+    reader_metadata = pypdf.PdfFileReader(metadata_file)
+    pdfmark = get_pdfmark(reader_metadata, options)
+    pdfmark['/Producer'] = 'PyMuPDF ' + fitz.version[0]
+    pymupdf_metadata = {(k[1].lower() + k[2:]) : v for k, v in pdfmark.items()}
+
+    for pdf_page in pdf_pages:
+        page = fitz.open(pdf_page)
+        doc.insertPDF(page)
+
+    metadata = fitz.open(metadata_file)
+    toc = metadata.getToC(simple=False)
+    doc.setToC(toc)
+    doc.setMetadata(pymupdf_metadata)
+    doc.save(output_file, garbage=4, deflate=True)
+
+
 def merge_sidecars(
         input_files_groups,
         output_file,
@@ -991,13 +1096,16 @@ def copy_final(
         context):
     input_file = next((ii for ii in input_files if ii.endswith('.pdf')))
 
-    if output_file == '-':
-        from shutil import copyfileobj
-        with open(input_file, 'rb') as input_stream:
+    with open(input_file, 'rb') as input_stream:
+        if output_file == '-':
             copyfileobj(input_stream, sys.stdout.buffer)
             sys.stdout.flush()
-    else:
-        shutil.copy(input_file, output_file)
+        else:
+            # At this point we overwrite the output_file specified by the user
+            # use copyfileobj because then we use open() to create the file and 
+            # get the appropriate umask, ownership, etc.
+            with open(output_file, 'wb') as output_stream:
+                copyfileobj(input_stream, output_stream)
 
 
 def build_pipeline(options, work_folder, log, context):
@@ -1011,8 +1119,8 @@ def build_pipeline(options, work_folder, log, context):
         output=os.path.join(work_folder, 'origin.pdf'),
         extras=[log, context])
 
-    task_repair_pdf = main_pipeline.transform(
-        task_func=repair_pdf,
+    task_repair_and_parse_pdf = main_pipeline.transform(
+        task_func=repair_and_parse_pdf,
         input=task_triage,
         filter=suffix('.pdf'),
         output='.repaired.pdf',
@@ -1020,16 +1128,31 @@ def build_pipeline(options, work_folder, log, context):
         extras=[log, context])
 
     # Split (kwargs for split seems to be broken, so pass plain args)
-    task_split_pages = main_pipeline.split(
-        split_pages,
-        task_repair_pdf,
-        os.path.join(work_folder, '*.page.pdf'),
+    task_pre_split_pages = main_pipeline.split(
+        pre_split_pages,
+        task_repair_and_parse_pdf,
+        os.path.join(work_folder, '*.presplit.pdf'),
+        extras=[log, context])
+
+    task_split_pages = main_pipeline.transform(
+        task_func=split_page,
+        input=task_pre_split_pages,
+        filter=suffix('.presplit.pdf'),
+        output='.page.pdf',
+        output_dir=work_folder,
+        extras=[log, context])
+
+    task_ocr_or_skip = main_pipeline.split(
+        ocr_or_skip,
+        task_split_pages,
+        [os.path.join(work_folder, '*.ocr.page.pdf'),
+         os.path.join(work_folder, '*.skip.page.pdf')],
         extras=[log, context])
 
     # Rasterize preview
     task_rasterize_preview = main_pipeline.transform(
         task_func=rasterize_preview,
-        input=task_split_pages,
+        input=task_ocr_or_skip,
         filter=suffix('.page.pdf'),
         output='.preview.jpg',
         output_dir=work_folder,
@@ -1039,7 +1162,7 @@ def build_pipeline(options, work_folder, log, context):
     # Orient
     task_orient_page = main_pipeline.collate(
         task_func=orient_page,
-        input=[task_split_pages, task_rasterize_preview],
+        input=[task_ocr_or_skip, task_rasterize_preview],
         filter=regex(r".*/(\d{6})(\.ocr|\.skip)(?:\.page\.pdf|\.preview\.jpg)"),
         output=os.path.join(work_folder, r'\1\2.oriented.pdf'),
         extras=[log, context])
@@ -1092,8 +1215,6 @@ def build_pipeline(options, work_folder, log, context):
         extras=[log, context])
     task_ocr_tesseract_hocr.graphviz(fillcolor='"#00cc66"')
     task_ocr_tesseract_hocr.active_if(options.pdf_renderer == 'hocr')
-    if tesseract.v4():
-        task_ocr_tesseract_hocr.jobs_limit(2)  # Uses multi-core on its own
 
     task_select_visible_page_image = main_pipeline.collate(
         task_func=select_visible_page_image,
@@ -1146,8 +1267,6 @@ def build_pipeline(options, work_folder, log, context):
         extras=[log, context])
     task_ocr_tesseract_textonly_pdf.graphviz(fillcolor='"#ff69b4"')
     task_ocr_tesseract_textonly_pdf.active_if(options.pdf_renderer == 'sandwich')
-    if tesseract.v4():
-        task_ocr_tesseract_textonly_pdf.jobs_limit(2)
 
     task_combine_layers = main_pipeline.collate(
         task_func=combine_layers,
@@ -1171,13 +1290,11 @@ def build_pipeline(options, work_folder, log, context):
         extras=[log, context])
     task_ocr_tesseract_and_render_pdf.graphviz(fillcolor='"#66ccff"')
     task_ocr_tesseract_and_render_pdf.active_if(options.pdf_renderer == 'tesseract')
-    if tesseract.v4():
-        task_ocr_tesseract_and_render_pdf.jobs_limit(2)  # Uses multi-core
 
     # PDF/A
     task_generate_postscript_stub = main_pipeline.transform(
         task_func=generate_postscript_stub,
-        input=task_repair_pdf,
+        input=task_repair_and_parse_pdf,
         filter=formatter(r'\.repaired\.pdf'),
         output=os.path.join(work_folder, 'pdfa.ps'),
         extras=[log, context])
@@ -1203,7 +1320,8 @@ def build_pipeline(options, work_folder, log, context):
                task_generate_postscript_stub],
         output=os.path.join(work_folder, 'merged.pdf'),
         extras=[log, context])
-    task_merge_pages_ghostscript.active_if(options.output_type.startswith('pdfa'))
+    task_merge_pages_ghostscript.active_if(
+        options.output_type.startswith('pdfa'))
 
     task_merge_pages_qpdf = main_pipeline.merge(
         task_func=merge_pages_qpdf,
@@ -1211,10 +1329,23 @@ def build_pipeline(options, work_folder, log, context):
                task_render_hocr_debug_page,
                task_skip_page,
                task_ocr_tesseract_and_render_pdf,
-               task_repair_pdf],
+               task_repair_and_parse_pdf],
         output=os.path.join(work_folder, 'merged.pdf'),
         extras=[log, context])
-    task_merge_pages_qpdf.active_if(options.output_type == 'pdf')
+    task_merge_pages_qpdf.active_if(
+        options.output_type == 'pdf' and not fitz)
+
+    task_merge_pages_mupdf = main_pipeline.merge(
+        task_func=merge_pages_mupdf,
+        input=[task_combine_layers,
+               task_render_hocr_debug_page,
+               task_skip_page,
+               task_ocr_tesseract_and_render_pdf,
+               task_repair_and_parse_pdf],
+        output=os.path.join(work_folder, 'merged.pdf'),
+        extras=[log, context])
+    task_merge_pages_mupdf.active_if(
+        options.output_type == 'pdf' and fitz)
 
     task_merge_sidecars = main_pipeline.merge(
         task_func=merge_sidecars,
@@ -1226,8 +1357,10 @@ def build_pipeline(options, work_folder, log, context):
     task_merge_sidecars.active_if(options.sidecar)
 
     # Finalize
-    task_copy_final = main_pipeline.merge(
+    main_pipeline.merge(
         task_func=copy_final,
-        input=[task_merge_pages_ghostscript, task_merge_pages_qpdf],
+        input=[task_merge_pages_ghostscript,
+               task_merge_pages_mupdf,
+               task_merge_pages_qpdf],
         output=options.output_file,
         extras=[log, context])

tests/cache/2400dpi/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/2400dpi/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/txt.bin

@@ -0,0 +1,25 @@
+a la Waterman
+
+4 ons linzen
+
+3 liter water
+
+3 uien
+
+bloem, boter
+
+2 kopjes melk
+
+laurier, kruidnagel, kerrie, zout
+
+De linzgen wassen en in -l liter kokend wa-
+ter 1 dag laten weken, 2 liter water bij
+de linzen voegen, zonder het water waarin
+ze geweekt zijn af te gieten, De helft van
+de uien bakken met laurier en Kruicdnagel.
+Alle uien, kerrie en gout bij de linzen
+voegen, Alles aan de kook brengen,. Van de
+bloem met boter en melk een papje maken en
+verder afmaken met de soep, Als de linzen
+gaar Zijn is de soep klaar.
+

tests/cache/aspect/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/stderr.bin

@@ -0,0 +1,3 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica
+Too few characters. Skipping this page
+OSD: Weak margin (0.00) for 24 blob text block, but using orientation anyway: 0

tests/cache/aspect/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/txt.bin

@@ -0,0 +1,4 @@
+ 
+
+This should be a perfect circle:
+

tests/cache/aspect/__-l__eng__000001.image__000001.rendered__pdf__txt/stderr.bin

@@ -0,0 +1,3 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica
+Too few characters. Skipping this page
+OSD: Weak margin (0.00) for 24 blob text block, but using orientation anyway: 0

tests/cache/aspect/__-l__eng__000001.image__000001.rendered__pdf__txt/txt.bin

@@ -0,0 +1,4 @@
+ 
+
+This should be a perfect circle:
+

tests/cache/aspect/__-l__eng__000001.ocr.png__000001__hocr__txt/hocr.bin

@@ -0,0 +1,27 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+    "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
+<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
+ <head>
+  <title></title>
+<meta http-equiv="Content-Type" content="text/html;charset=utf-8" />
+  <meta name='ocr-system' content='tesseract 4.0.0-beta.1' />
+  <meta name='ocr-capabilities' content='ocr_page ocr_carea ocr_par ocr_line ocrx_word'/>
+</head>
+<body>
+  <div class='ocr_page' id='page_1' title='image "/var/folders/37/78_114p552q16vv6vmgm5kr00000gn/T/com.github.ocrmypdf.4nwu81i8/000001.ocr.png"; bbox 0 0 1000 800; ppageno 0'>
+   <div class='ocr_carea' id='block_1_1' title="bbox 296 96 704 504">
+    <p class='ocr_par' id='par_1_1' lang='eng' title="bbox 296 96 704 504">
+     <span class='ocr_line' id='line_1_1' title="bbox 296 96 704 504; baseline 0 296; x_size 169.33333; x_descenders 42.333332; x_ascenders 42.333336"><span class='ocrx_word' id='word_1_1' title='bbox 296 96 704 504; x_wconf 95'><strong> </strong></span> 
+     </span>
+    </p>
+   </div>
+   <div class='ocr_carea' id='block_1_2' title="bbox 150 592 841 622">
+    <p class='ocr_par' id='par_1_2' lang='eng' title="bbox 150 592 841 622">
+     <span class='ocr_line' id='line_1_2' title="bbox 150 592 841 622; baseline 0 -6; x_size 30; x_descenders 6; x_ascenders 8"><span class='ocrx_word' id='word_1_2' title='bbox 150 592 230 616; x_wconf 96'><strong>This</strong></span> <span class='ocrx_word' id='word_1_3' title='bbox 260 592 384 616; x_wconf 95'><strong>should</strong></span> <span class='ocrx_word' id='word_1_4' title='bbox 413 592 449 616; x_wconf 95'><strong>be</strong></span> <span class='ocrx_word' id='word_1_5' title='bbox 479 600 493 616; x_wconf 95'><strong>a</strong></span> <span class='ocrx_word' id='word_1_6' title='bbox 523 592 668 622; x_wconf 95'><strong>perfect</strong></span> <span class='ocrx_word' id='word_1_7' title='bbox 698 592 841 616; x_wconf 55'><strong>circle:</strong></span> 
+     </span>
+    </p>
+   </div>
+  </div>
+ </body>
+</html>

tests/cache/aspect/__-l__eng__000001.ocr.png__000001__hocr__txt/stderr.bin

@@ -0,0 +1,3 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica
+Too few characters. Skipping this page
+OSD: Weak margin (0.00) for 24 blob text block, but using orientation anyway: 0

tests/cache/aspect/__-l__eng__000001.ocr.png__000001__hocr__txt/txt.bin

@@ -0,0 +1,4 @@
+ 
+
+This should be a perfect circle:
+

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/txt.bin

@@ -0,0 +1,123 @@
+The LinnSequencer
+32 Track MIDI Sequence Recorder
+
+The LinnSequencer is a state-of-the-art composition and performance tool for the professional musician. It is
+
+extremely powerful, yet amazingly simple to learn and use. It’s many remarkable features include:
+
+¢ Operation is similar to multi-track tape recorder with PLAY, STOP, RECORD, FAST
+FORWARD, REWIND, and LOCATE controls.
+
+e Each of the 100 sequences contains 32 simultaneous, polyphonic tracks. Each track may
+be assigned to one of 16 MIDI channels. Simultaneously plays up to 16 polyphonic
+
+synthesizers!
+
+¢ Ultra-fast 3%” disk drive stores complex songs in seconds and holds over 110,000 notes
+
+per disk!
+
+¢ One or all tracks may be TRANSPOSED at the touch of a key.
+e Exclusive real-time ERASE function makes editing FAST.
+* Exclusive REPEAT function automatically repeats any held notes at a pre-selected
+
+rhythmic value.
+
+¢ TIMING CORRECTION works during playback and operates without ‘chopping’ notes.
+
+¢ Optional SMPTE time code synchronization.
+
+© Optional remote control.
+
+Recording a Sequence
+
+To record a sequence, simply press RECORD and PLAY,
+then play your MIDI keyboard in time to the Sequencer’s
+click track. When the sequence loops back around to bar 1,
+you’ ll hear what you played—only all timing errors will be
+
+corrected! (Timing correction may be adjusted or defeated).
+
+Any additional notes played will be added into the track
+— existing notes are not erased while recording!
+
+FAST FORWARD, REWIND, and LOCATE controls
+may be used at any time to quickly access any location in
+your sequence for spot-recording. To overdub a new part,
+select a different track and start recording—while you
+record, the first track will play in perfect sync (unless you
+MUTE it, or SOLO another track). In this way, up to 32
+tracks may be overdubbed! All MIDI effects are recorded
+including pitch bend, modulation, velocity, aftertouch,
+sustain pedal, and program changes!
+
+Editing
+
+To erase a wrong note, simply hold ERASE and press
+the note to be erased just before it plays in the sequence—
+when played back, it will be gone. Notes may also be
+
+added, erased, or changed using the SINGLE STEP func-
+tion. To overdub notes at specific points within a sequence,
+
+Additional Features
+
+simply use LOCATE, FAST FORWARD, or REWIND to
+find the desired bar number, then start recording.
+
+The INSERT/COPY function allows you to move bars
+from one location to another—in the same sequence or a
+different one. For example, you might insert a copy of the
+first verse between the second chorus and the bridge.
+DELETE BARS operates the same way to remove
+unwanted sections,
+
+Creating a Song
+
+One way to create a song is to record each track all the
+way through (up to 999 bars). Another way is to record
+each basic section (verse, chorus, etc.) in individual
+sequences, then use the CREATE SONG function to “chain”
+them together. CREATE SONG will then automatically
+copy all the parts into a new sequence. If desired, you can
+even set the last few bars to repeat infinitely, for a fadeout.
+
+Composition Without Compromise
+
+The technology you use should never be so complex that
+it interferes with the creative process. That’s precisely why
+the LinnSequencer is designed to let you compose, record
+and edit while devoting your undivided attention to your
+music. See your Linn dealer today for a demonstration!
+
+* Simple, easy to learn operation—the 32 character LCD display clearly guides you through all operations. If needed, the
+
+HELP button displays additional explanations.
+
+* Non-destructive recording—existing notes are not erased while recording.
+¢ Two FOOTSWITCH INPUTS may be assigned to remotely control many of the commonly used functions, including
+
+ERASE, REPEAT, PLAY/STOP, or LOCATE.
+
+¢ Iwo TRIGGER OUTPUTS may be programmed to output pulses at any selected note value.
+
+© Will sync to standard LinnDrum or Linn 9000 sync tone.
+
+© Utilizes ultra high-speed, 8 MHz 80186 16 bit computer internally for FAST operation.
+* TEMPO may be specified in BEATS-PER-MINUTE or FRAMES-PER-BEAT at 24, 25, or 30 frames per second,
+
+(even drop frame!)
+
+¢ TEMPO may be entered numerically, adjustable in tenths of a Beat-Per-Minute increments, or by tapping quarter notes
+
+on the TAP TEMPO button.
+
+¢ TEMPO CHANGES may be programmed into a sequence, with smooth transitions if desired.
+¢ Any TIME SIGNATURE may be used, and may be changed within a song.
+
+linn
+Linn Electronics, Inc.
+
+18720 Oxnard Street, Tarzana, CA 91356
+(818) 708-8131 TELEX #298949 LINN UR
+

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000002.ocr.png__000002.text__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000002.ocr.png__000002.text__pdf__txt/txt.bin

@@ -0,0 +1,123 @@
+The LinnSequencer
+32 Track MIDI Sequence Recorder
+
+The LinnSequencer is a state-of-the-art composition and performance tool for the professional musician. It is
+
+extremely powerful, yet amazingly simple to learn and use. It’s many remarkable features include:
+
+¢ Operation is similar to multi-track tape recorder with PLAY, STOP, RECORD, FAST
+FORWARD, REWIND, and LOCATE controls.
+
+e Each of the 100 sequences contains 32 simultaneous, polyphonic tracks. Each track may
+be assigned to one of 16 MIDI channels. Simultaneously plays up to 16 polyphonic
+
+synthesizers!
+
+¢ Ultra-fast 3%” disk drive stores complex songs in seconds and holds over 110,000 notes
+
+per disk!
+
+¢ One or all tracks may be TRANSPOSED at the touch of a key.
+e Exclusive real-time ERASE function makes editing FAST.
+* Exclusive REPEAT function automatically repeats any held notes at a pre-selected
+
+rhythmic value.
+
+¢ TIMING CORRECTION works during playback and operates without ‘chopping’ notes.
+
+¢ Optional SMPTE time code synchronization.
+
+© Optional remote control.
+
+Recording a Sequence
+
+To record a sequence, simply press RECORD and PLAY,
+then play your MIDI keyboard in time to the Sequencer’s
+click track. When the sequence loops back around to bar 1,
+you’ ll hear what you played—only all timing errors will be
+
+corrected! (Timing correction may be adjusted or defeated).
+
+Any additional notes played will be added into the track
+— existing notes are not erased while recording!
+
+FAST FORWARD, REWIND, and LOCATE controls
+may be used at any time to quickly access any location in
+your sequence for spot-recording. To overdub a new part,
+select a different track and start recording—while you
+record, the first track will play in perfect sync (unless you
+MUTE it, or SOLO another track). In this way, up to 32
+tracks may be overdubbed! All MIDI effects are recorded
+including pitch bend, modulation, velocity, aftertouch,
+sustain pedal, and program changes!
+
+Editing
+
+To erase a wrong note, simply hold ERASE and press
+the note to be erased just before it plays in the sequence—
+when played back, it will be gone. Notes may also be
+
+added, erased, or changed using the SINGLE STEP func-
+tion. To overdub notes at specific points within a sequence,
+
+Additional Features
+
+simply use LOCATE, FAST FORWARD, or REWIND to
+find the desired bar number, then start recording.
+
+The INSERT/COPY function allows you to move bars
+from one location to another—in the same sequence or a
+different one. For example, you might insert a copy of the
+first verse between the second chorus and the bridge.
+DELETE BARS operates the same way to remove
+unwanted sections,
+
+Creating a Song
+
+One way to create a song is to record each track all the
+way through (up to 999 bars). Another way is to record
+each basic section (verse, chorus, etc.) in individual
+sequences, then use the CREATE SONG function to “chain”
+them together. CREATE SONG will then automatically
+copy all the parts into a new sequence. If desired, you can
+even set the last few bars to repeat infinitely, for a fadeout.
+
+Composition Without Compromise
+
+The technology you use should never be so complex that
+it interferes with the creative process. That’s precisely why
+the LinnSequencer is designed to let you compose, record
+and edit while devoting your undivided attention to your
+music. See your Linn dealer today for a demonstration!
+
+* Simple, easy to learn operation—the 32 character LCD display clearly guides you through all operations. If needed, the
+
+HELP button displays additional explanations.
+
+* Non-destructive recording—existing notes are not erased while recording.
+¢ Two FOOTSWITCH INPUTS may be assigned to remotely control many of the commonly used functions, including
+
+ERASE, REPEAT, PLAY/STOP, or LOCATE.
+
+¢ Iwo TRIGGER OUTPUTS may be programmed to output pulses at any selected note value.
+
+© Will sync to standard LinnDrum or Linn 9000 sync tone.
+
+© Utilizes ultra high-speed, 8 MHz 80186 16 bit computer internally for FAST operation.
+* TEMPO may be specified in BEATS-PER-MINUTE or FRAMES-PER-BEAT at 24, 25, or 30 frames per second,
+
+(even drop frame!)
+
+¢ TEMPO may be entered numerically, adjustable in tenths of a Beat-Per-Minute increments, or by tapping quarter notes
+
+on the TAP TEMPO button.
+
+¢ TEMPO CHANGES may be programmed into a sequence, with smooth transitions if desired.
+¢ Any TIME SIGNATURE may be used, and may be changed within a song.
+
+linn
+Linn Electronics, Inc.
+
+18720 Oxnard Street, Tarzana, CA 91356
+(818) 708-8131 TELEX #298949 LINN UR
+

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000003.ocr.png__000003.text__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000003.ocr.png__000003.text__pdf__txt/txt.bin

@@ -0,0 +1,123 @@
+The LinnSequencer
+32 Track MIDI Sequence Recorder
+
+The LinnSequencer is a state-of-the-art composition and performance tool for the professional musician. It is
+
+extremely powerful, yet amazingly simple to learn and use. It’s many remarkable features include:
+
+¢ Operation is similar to multi-track tape recorder with PLAY, STOP, RECORD, FAST
+FORWARD, REWIND, and LOCATE controls.
+
+e Each of the 100 sequences contains 32 simultaneous, polyphonic tracks. Each track may
+be assigned to one of 16 MIDI channels. Simultaneously plays up to 16 polyphonic
+
+synthesizers!
+
+¢ Ultra-fast 3%” disk drive stores complex songs in seconds and holds over 110,000 notes
+
+per disk!
+
+¢ One or all tracks may be TRANSPOSED at the touch of a key.
+e Exclusive real-time ERASE function makes editing FAST.
+* Exclusive REPEAT function automatically repeats any held notes at a pre-selected
+
+rhythmic value.
+
+¢ TIMING CORRECTION works during playback and operates without ‘chopping’ notes.
+
+¢ Optional SMPTE time code synchronization.
+
+© Optional remote control.
+
+Recording a Sequence
+
+To record a sequence, simply press RECORD and PLAY,
+then play your MIDI keyboard in time to the Sequencer’s
+click track. When the sequence loops back around to bar 1,
+you’ ll hear what you played—only all timing errors will be
+
+corrected! (Timing correction may be adjusted or defeated).
+
+Any additional notes played will be added into the track
+— existing notes are not erased while recording!
+
+FAST FORWARD, REWIND, and LOCATE controls
+may be used at any time to quickly access any location in
+your sequence for spot-recording. To overdub a new part,
+select a different track and start recording—while you
+record, the first track will play in perfect sync (unless you
+MUTE it, or SOLO another track). In this way, up to 32
+tracks may be overdubbed! All MIDI effects are recorded
+including pitch bend, modulation, velocity, aftertouch,
+sustain pedal, and program changes!
+
+Editing
+
+To erase a wrong note, simply hold ERASE and press
+the note to be erased just before it plays in the sequence—
+when played back, it will be gone. Notes may also be
+
+added, erased, or changed using the SINGLE STEP func-
+tion. To overdub notes at specific points within a sequence,
+
+Additional Features
+
+simply use LOCATE, FAST FORWARD, or REWIND to
+find the desired bar number, then start recording.
+
+The INSERT/COPY function allows you to move bars
+from one location to another—in the same sequence or a
+different one. For example, you might insert a copy of the
+first verse between the second chorus and the bridge.
+DELETE BARS operates the same way to remove
+unwanted sections,
+
+Creating a Song
+
+One way to create a song is to record each track all the
+way through (up to 999 bars). Another way is to record
+each basic section (verse, chorus, etc.) in individual
+sequences, then use the CREATE SONG function to “chain”
+them together. CREATE SONG will then automatically
+copy all the parts into a new sequence. If desired, you can
+even set the last few bars to repeat infinitely, for a fadeout.
+
+Composition Without Compromise
+
+The technology you use should never be so complex that
+it interferes with the creative process. That’s precisely why
+the LinnSequencer is designed to let you compose, record
+and edit while devoting your undivided attention to your
+music. See your Linn dealer today for a demonstration!
+
+* Simple, easy to learn operation—the 32 character LCD display clearly guides you through all operations. If needed, the
+
+HELP button displays additional explanations.
+
+* Non-destructive recording—existing notes are not erased while recording.
+¢ Two FOOTSWITCH INPUTS may be assigned to remotely control many of the commonly used functions, including
+
+ERASE, REPEAT, PLAY/STOP, or LOCATE.
+
+¢ Iwo TRIGGER OUTPUTS may be programmed to output pulses at any selected note value.
+
+© Will sync to standard LinnDrum or Linn 9000 sync tone.
+
+© Utilizes ultra high-speed, 8 MHz 80186 16 bit computer internally for FAST operation.
+* TEMPO may be specified in BEATS-PER-MINUTE or FRAMES-PER-BEAT at 24, 25, or 30 frames per second,
+
+(even drop frame!)
+
+¢ TEMPO may be entered numerically, adjustable in tenths of a Beat-Per-Minute increments, or by tapping quarter notes
+
+on the TAP TEMPO button.
+
+¢ TEMPO CHANGES may be programmed into a sequence, with smooth transitions if desired.
+¢ Any TIME SIGNATURE may be used, and may be changed within a song.
+
+linn
+Linn Electronics, Inc.
+
+18720 Oxnard Street, Tarzana, CA 91356
+(818) 708-8131 TELEX #298949 LINN UR
+

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000004.ocr.png__000004.text__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/cardinal/__-l__eng__-c__textonly_pdf=1__000004.ocr.png__000004.text__pdf__txt/txt.bin

@@ -0,0 +1,123 @@
+The LinnSequencer
+32 Track MIDI Sequence Recorder
+
+The LinnSequencer is a state-of-the-art composition and performance tool for the professional musician. It is
+
+extremely powerful, yet amazingly simple to learn and use. It’s many remarkable features include:
+
+¢ Operation is similar to multi-track tape recorder with PLAY, STOP, RECORD, FAST
+FORWARD, REWIND, and LOCATE controls.
+
+e Each of the 100 sequences contains 32 simultaneous, polyphonic tracks. Each track may
+be assigned to one of 16 MIDI channels. Simultaneously plays up to 16 polyphonic
+
+synthesizers!
+
+¢ Ultra-fast 3%” disk drive stores complex songs in seconds and holds over 110,000 notes
+
+per disk!
+
+¢ One or all tracks may be TRANSPOSED at the touch of a key.
+e Exclusive real-time ERASE function makes editing FAST.
+* Exclusive REPEAT function automatically repeats any held notes at a pre-selected
+
+rhythmic value.
+
+¢ TIMING CORRECTION works during playback and operates without ‘chopping’ notes.
+
+¢ Optional SMPTE time code synchronization.
+
+© Optional remote control.
+
+Recording a Sequence
+
+To record a sequence, simply press RECORD and PLAY,
+then play your MIDI keyboard in time to the Sequencer’s
+click track. When the sequence loops back around to bar 1,
+you’ ll hear what you played—only all timing errors will be
+
+corrected! (Timing correction may be adjusted or defeated).
+
+Any additional notes played will be added into the track
+— existing notes are not erased while recording!
+
+FAST FORWARD, REWIND, and LOCATE controls
+may be used at any time to quickly access any location in
+your sequence for spot-recording. To overdub a new part,
+select a different track and start recording—while you
+record, the first track will play in perfect sync (unless you
+MUTE it, or SOLO another track). In this way, up to 32
+tracks may be overdubbed! All MIDI effects are recorded
+including pitch bend, modulation, velocity, aftertouch,
+sustain pedal, and program changes!
+
+Editing
+
+To erase a wrong note, simply hold ERASE and press
+the note to be erased just before it plays in the sequence—
+when played back, it will be gone. Notes may also be
+
+added, erased, or changed using the SINGLE STEP func-
+tion. To overdub notes at specific points within a sequence,
+
+Additional Features
+
+simply use LOCATE, FAST FORWARD, or REWIND to
+find the desired bar number, then start recording.
+
+The INSERT/COPY function allows you to move bars
+from one location to another—in the same sequence or a
+different one. For example, you might insert a copy of the
+first verse between the second chorus and the bridge.
+DELETE BARS operates the same way to remove
+unwanted sections,
+
+Creating a Song
+
+One way to create a song is to record each track all the
+way through (up to 999 bars). Another way is to record
+each basic section (verse, chorus, etc.) in individual
+sequences, then use the CREATE SONG function to “chain”
+them together. CREATE SONG will then automatically
+copy all the parts into a new sequence. If desired, you can
+even set the last few bars to repeat infinitely, for a fadeout.
+
+Composition Without Compromise
+
+The technology you use should never be so complex that
+it interferes with the creative process. That’s precisely why
+the LinnSequencer is designed to let you compose, record
+and edit while devoting your undivided attention to your
+music. See your Linn dealer today for a demonstration!
+
+* Simple, easy to learn operation—the 32 character LCD display clearly guides you through all operations. If needed, the
+
+HELP button displays additional explanations.
+
+* Non-destructive recording—existing notes are not erased while recording.
+¢ Two FOOTSWITCH INPUTS may be assigned to remotely control many of the commonly used functions, including
+
+ERASE, REPEAT, PLAY/STOP, or LOCATE.
+
+¢ Iwo TRIGGER OUTPUTS may be programmed to output pulses at any selected note value.
+
+© Will sync to standard LinnDrum or Linn 9000 sync tone.
+
+© Utilizes ultra high-speed, 8 MHz 80186 16 bit computer internally for FAST operation.
+* TEMPO may be specified in BEATS-PER-MINUTE or FRAMES-PER-BEAT at 24, 25, or 30 frames per second,
+
+(even drop frame!)
+
+¢ TEMPO may be entered numerically, adjustable in tenths of a Beat-Per-Minute increments, or by tapping quarter notes
+
+on the TAP TEMPO button.
+
+¢ TEMPO CHANGES may be programmed into a sequence, with smooth transitions if desired.
+¢ Any TIME SIGNATURE may be used, and may be changed within a song.
+
+linn
+Linn Electronics, Inc.
+
+18720 Oxnard Street, Tarzana, CA 91356
+(818) 708-8131 TELEX #298949 LINN UR
+

tests/cache/cardinal/__-l__osd__--psm__0__000001.ocr.preview.jpg__stdout/stderr.bin

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tests/cache/cardinal/__-l__osd__--psm__0__000001.ocr.preview.jpg__stdout/stdout.bin

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tests/cache/cardinal/__-l__osd__--psm__0__000002.ocr.preview.jpg__stdout/stdout.bin

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+Page number: 0
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+Page number: 0
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tests/cache/cardinal/__-l__osd__--psm__0__000004.ocr.preview.jpg__stdout/stdout.bin

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tests/cache/ccitt/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/stderr.bin

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+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica

tests/cache/ccitt/__-l__eng__-c__textonly_pdf=1__000001.ocr.png__000001.text__pdf__txt/txt.bin

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+The LinnSequencer
+32 Track MIDI Sequence Recorder
+
+The LinnSequencer is a state-of-the-art composition and performance tool for the professional musician. It is
+
+extremely powerful, yet amazingly simple to learn and use. It’s many remarkable features include:
+
+¢ Operation is similar to multi-track tape recorder with PLAY, STOP, RECORD, FAST
+FORWARD, REWIND, and LOCATE controls.
+
+e Each of the 100 sequences contains 32 simultaneous, polyphonic tracks. Each track may
+be assigned to one of 16 MIDI channels. Simultaneously plays up to 16 polyphonic
+
+synthesizers!
+
+¢ Ultra-fast 3%” disk drive stores complex songs in seconds and holds over 110,000 notes
+
+per disk!
+
+¢ One or all tracks may be TRANSPOSED at the touch of a key.
+e Exclusive real-time ERASE function makes editing FAST.
+* Exclusive REPEAT function automatically repeats any held notes at a pre-selected
+
+rhythmic value.
+
+¢ TIMING CORRECTION works during playback and operates without ‘chopping’ notes.
+
+¢ Optional SMPTE time code synchronization.
+
+© Optional remote control.
+
+Recording a Sequence
+
+To record a sequence, simply press RECORD and PLAY,
+then play your MIDI keyboard in time to the Sequencer’s
+click track. When the sequence loops back around to bar 1,
+you’ ll hear what you played—only all timing errors will be
+
+corrected! (Timing correction may be adjusted or defeated).
+
+Any additional notes played will be added into the track
+— existing notes are not erased while recording!
+
+FAST FORWARD, REWIND, and LOCATE controls
+may be used at any time to quickly access any location in
+your sequence for spot-recording. To overdub a new part,
+select a different track and start recording—while you
+record, the first track will play in perfect sync (unless you
+MUTE it, or SOLO another track). In this way, up to 32
+tracks may be overdubbed! All MIDI effects are recorded
+including pitch bend, modulation, velocity, aftertouch,
+sustain pedal, and program changes!
+
+Editing
+
+To erase a wrong note, simply hold ERASE and press
+the note to be erased just before it plays in the sequence—
+when played back, it will be gone. Notes may also be
+
+added, erased, or changed using the SINGLE STEP func-
+tion. To overdub notes at specific points within a sequence,
+
+Additional Features
+
+simply use LOCATE, FAST FORWARD, or REWIND to
+find the desired bar number, then start recording.
+
+The INSERT/COPY function allows you to move bars
+from one location to another—in the same sequence or a
+different one. For example, you might insert a copy of the
+first verse between the second chorus and the bridge.
+DELETE BARS operates the same way to remove
+unwanted sections,
+
+Creating a Song
+
+One way to create a song is to record each track all the
+way through (up to 999 bars). Another way is to record
+each basic section (verse, chorus, etc.) in individual
+sequences, then use the CREATE SONG function to “chain”
+them together. CREATE SONG will then automatically
+copy all the parts into a new sequence. If desired, you can
+even set the last few bars to repeat infinitely, for a fadeout.
+
+Composition Without Compromise
+
+The technology you use should never be so complex that
+it interferes with the creative process. That’s precisely why
+the LinnSequencer is designed to let you compose, record
+and edit while devoting your undivided attention to your
+music. See your Linn dealer today for a demonstration!
+
+* Simple, easy to learn operation—the 32 character LCD display clearly guides you through all operations. If needed, the
+
+HELP button displays additional explanations.
+
+* Non-destructive recording—existing notes are not erased while recording.
+¢ Two FOOTSWITCH INPUTS may be assigned to remotely control many of the commonly used functions, including
+
+ERASE, REPEAT, PLAY/STOP, or LOCATE.
+
+¢ Iwo TRIGGER OUTPUTS may be programmed to output pulses at any selected note value.
+
+© Will sync to standard LinnDrum or Linn 9000 sync tone.
+
+© Utilizes ultra high-speed, 8 MHz 80186 16 bit computer internally for FAST operation.
+* TEMPO may be specified in BEATS-PER-MINUTE or FRAMES-PER-BEAT at 24, 25, or 30 frames per second,
+
+(even drop frame!)
+
+¢ TEMPO may be entered numerically, adjustable in tenths of a Beat-Per-Minute increments, or by tapping quarter notes
+
+on the TAP TEMPO button.
+
+¢ TEMPO CHANGES may be programmed into a sequence, with smooth transitions if desired.
+¢ Any TIME SIGNATURE may be used, and may be changed within a song.
+
+linn
+Linn Electronics, Inc.
+
+18720 Oxnard Street, Tarzana, CA 91356
+(818) 708-8131 TELEX #298949 LINN UR
+

tests/cache/ccitt/__-l__eng__000001.image__000001.rendered__pdf__txt/stderr.bin

@@ -0,0 +1 @@
+Tesseract Open Source OCR Engine v4.0.0-beta.1 with Leptonica